Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

DEFT1P2 (defensin, theta 1 pseudogene 2)

Identity

Other alias-
HGNC (Hugo) DEFT1P2
LocusID (NCBI) 100287083
Atlas_Id 54880
Location 8p23.1  [Link to chromosome band 8p23]
Location_base_pair Starts at 6987178 and ends at 6989721 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DEFT1P2   33599
Cards
Entrez_Gene (NCBI)DEFT1P2  100287083  defensin, theta 1 pseudogene 2
Aliases
GeneCards (Weizmann)DEFT1P2
Ensembl hg19 (Hinxton)ENSG00000232039 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232039 [Gene_View]  chr8:6987178-6989721 [Contig_View]  DEFT1P2 [Vega]
ICGC DataPortalENSG00000232039
TCGA cBioPortalDEFT1P2
AceView (NCBI)DEFT1P2
Genatlas (Paris)DEFT1P2
WikiGenes100287083
SOURCE (Princeton)DEFT1P2
Genetics Home Reference (NIH)DEFT1P2
Genomic and cartography
GoldenPath hg38 (UCSC)DEFT1P2  -     chr8:6987178-6989721 -  8p23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DEFT1P2  -     8p23.1   [Description]    (hg19-Feb_2009)
EnsemblDEFT1P2 - 8p23.1 [CytoView hg19]  DEFT1P2 - 8p23.1 [CytoView hg38]
Mapping of homologs : NCBIDEFT1P2 [Mapview hg19]  DEFT1P2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF355799 BC069283
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DEFT1P2
Cluster EST : UnigeneHs.690009 [ NCBI ]
CGAP (NCI)Hs.690009
Alternative Splicing GalleryENSG00000232039
Gene ExpressionDEFT1P2 [ NCBI-GEO ]   DEFT1P2 [ EBI - ARRAY_EXPRESS ]   DEFT1P2 [ SEEK ]   DEFT1P2 [ MEM ]
Gene Expression Viewer (FireBrowse)DEFT1P2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287083
GTEX Portal (Tissue expression)DEFT1P2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DEFT1P2
DMDM Disease mutations100287083
Blocks (Seattle)DEFT1P2
Human Protein AtlasENSG00000232039
Protein Interaction databases
FunCoupENSG00000232039
BioGRIDDEFT1P2
STRING (EMBL)DEFT1P2
ZODIACDEFT1P2
Ontologies - Pathways
Huge Navigator DEFT1P2 [HugePedia]
snp3D : Map Gene to Disease100287083
BioCentury BCIQDEFT1P2
ClinGenDEFT1P2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287083
Clinical trialDEFT1P2
Miscellaneous
canSAR (ICR)DEFT1P2 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDEFT1P2
EVEXDEFT1P2
GoPubMedDEFT1P2
iHOPDEFT1P2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 12:13:05 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.