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DEUP1 (deuterosome assembly protein 1)

Identity

Alias (NCBI)CCDC67
HGNC (Hugo) DEUP1
HGNC Alias symbFLJ25393
HGNC Previous nameCCDC67
HGNC Previous namecoiled-coil domain containing 67
LocusID (NCBI) 159989
Atlas_Id 55824
Location 11q21  [Link to chromosome band 11q21]
Location_base_pair Starts at 93330717 and ends at 93438471 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)DEUP1   26344
Cards
Entrez_Gene (NCBI)DEUP1    deuterosome assembly protein 1
AliasesCCDC67
GeneCards (Weizmann)DEUP1
Ensembl hg19 (Hinxton)ENSG00000165325 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165325 [Gene_View]  ENSG00000165325 [Sequence]  chr11:93330717-93438471 [Contig_View]  DEUP1 [Vega]
ICGC DataPortalENSG00000165325
TCGA cBioPortalDEUP1
AceView (NCBI)DEUP1
Genatlas (Paris)DEUP1
SOURCE (Princeton)DEUP1
Genetics Home Reference (NIH)DEUP1
Genomic and cartography
GoldenPath hg38 (UCSC)DEUP1  -     chr11:93330717-93438471 +  11q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DEUP1  -     11q21   [Description]    (hg19-Feb_2009)
GoldenPathDEUP1 - 11q21 [CytoView hg19]  DEUP1 - 11q21 [CytoView hg38]
ImmunoBaseENSG00000165325
Genome Data Viewer NCBIDEUP1 [Mapview hg19]  
OMIM617148   
Gene and transcription
Genbank (Entrez)AK058122 AK127973 BC017929 BC031247 BC050325
RefSeq transcript (Entrez)NM_181645
Consensus coding sequences : CCDS (NCBI)DEUP1
Gene ExpressionDEUP1 [ NCBI-GEO ]   DEUP1 [ EBI - ARRAY_EXPRESS ]   DEUP1 [ SEEK ]   DEUP1 [ MEM ]
Gene Expression Viewer (FireBrowse)DEUP1 [ Firebrowse - Broad ]
GenevisibleExpression of DEUP1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)159989
GTEX Portal (Tissue expression)DEUP1
Human Protein AtlasENSG00000165325-DEUP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ05D60   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ05D60  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ05D60
PhosPhoSitePlusQ05D60
Domains : Interpro (EBI)Cep63/Deup1_N    Deup1   
Domain families : Pfam (Sanger)CEP63 (PF17045)   
Domain families : Pfam (NCBI)pfam17045   
Conserved Domain (NCBI)DEUP1
SuperfamilyQ05D60
AlphaFold pdb e-kbQ05D60   
Human Protein Atlas [tissue]ENSG00000165325-DEUP1 [tissue]
HPRD08689
Protein Interaction databases
DIP (DOE-UCLA)Q05D60
IntAct (EBI)Q05D60
BioGRIDDEUP1
STRING (EMBL)DEUP1
ZODIACDEUP1
Ontologies - Pathways
QuickGOQ05D60
Ontology : AmiGOprotein binding  cytoplasm  centriole  centriole replication  cell projection organization  identical protein binding  de novo centriole assembly involved in multi-ciliated epithelial cell differentiation  de novo centriole assembly involved in multi-ciliated epithelial cell differentiation  deuterosome  deuterosome  multi-ciliated epithelial cell differentiation  
Ontology : EGO-EBIprotein binding  cytoplasm  centriole  centriole replication  cell projection organization  identical protein binding  de novo centriole assembly involved in multi-ciliated epithelial cell differentiation  de novo centriole assembly involved in multi-ciliated epithelial cell differentiation  deuterosome  deuterosome  multi-ciliated epithelial cell differentiation  
NDEx NetworkDEUP1
Atlas of Cancer Signalling NetworkDEUP1
Wikipedia pathwaysDEUP1
Orthology - Evolution
OrthoDB159989
GeneTree (enSembl)ENSG00000165325
Phylogenetic Trees/Animal Genes : TreeFamDEUP1
Homologs : HomoloGeneDEUP1
Homology/Alignments : Family Browser (UCSC)DEUP1
Gene fusions - Rearrangements
Fusion : QuiverDEUP1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDEUP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DEUP1
dbVarDEUP1
ClinVarDEUP1
MonarchDEUP1
1000_GenomesDEUP1 
Exome Variant ServerDEUP1
GNOMAD BrowserENSG00000165325
Varsome BrowserDEUP1
ACMGDEUP1 variants
VarityQ05D60
Genomic Variants (DGV)DEUP1 [DGVbeta]
DECIPHERDEUP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDEUP1 
Mutations
ICGC Data PortalDEUP1 
TCGA Data PortalDEUP1 
Broad Tumor PortalDEUP1
OASIS PortalDEUP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDEUP1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DDEUP1
Mutations and Diseases : HGMDDEUP1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaDEUP1
DgiDB (Drug Gene Interaction Database)DEUP1
DoCM (Curated mutations)DEUP1
CIViC (Clinical Interpretations of Variants in Cancer)DEUP1
Cancer3DDEUP1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617148   
Orphanet
DisGeNETDEUP1
MedgenDEUP1
Genetic Testing Registry DEUP1
NextProtQ05D60 [Medical]
GENETestsDEUP1
Target ValidationDEUP1
Huge Navigator DEUP1 [HugePedia]
ClinGenDEUP1
Clinical trials, drugs, therapy
MyCancerGenomeDEUP1
Protein Interactions : CTDDEUP1
Pharm GKB GenePA143485419
PharosQ05D60
Clinical trialDEUP1
Miscellaneous
canSAR (ICR)DEUP1
HarmonizomeDEUP1
DataMed IndexDEUP1
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXDEUP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:06:35 CEST 2021

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