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DEUP1 (deuterosome assembly protein 1)

Identity

Alias_namesCCDC67
coiled-coil domain containing 67
Alias_symbol (synonym)FLJ25393
Other alias
HGNC (Hugo) DEUP1
LocusID (NCBI) 159989
Atlas_Id 55824
Location 11q21  [Link to chromosome band 11q21]
Location_base_pair Starts at 93330717 and ends at 93438471 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DEUP1   26344
Cards
Entrez_Gene (NCBI)DEUP1  159989  deuterosome assembly protein 1
AliasesCCDC67
GeneCards (Weizmann)DEUP1
Ensembl hg19 (Hinxton)ENSG00000165325 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165325 [Gene_View]  chr11:93330717-93438471 [Contig_View]  DEUP1 [Vega]
ICGC DataPortalENSG00000165325
TCGA cBioPortalDEUP1
AceView (NCBI)DEUP1
Genatlas (Paris)DEUP1
WikiGenes159989
SOURCE (Princeton)DEUP1
Genetics Home Reference (NIH)DEUP1
Genomic and cartography
GoldenPath hg38 (UCSC)DEUP1  -     chr11:93330717-93438471 +  11q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DEUP1  -     11q21   [Description]    (hg19-Feb_2009)
EnsemblDEUP1 - 11q21 [CytoView hg19]  DEUP1 - 11q21 [CytoView hg38]
Mapping of homologs : NCBIDEUP1 [Mapview hg19]  DEUP1 [Mapview hg38]
OMIM617148   
Gene and transcription
Genbank (Entrez)AK058122 AK127973 BC017929 BC031247 BC050325
RefSeq transcript (Entrez)NM_181645
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DEUP1
Cluster EST : UnigeneHs.436625 [ NCBI ]
CGAP (NCI)Hs.436625
Alternative Splicing GalleryENSG00000165325
Gene ExpressionDEUP1 [ NCBI-GEO ]   DEUP1 [ EBI - ARRAY_EXPRESS ]   DEUP1 [ SEEK ]   DEUP1 [ MEM ]
Gene Expression Viewer (FireBrowse)DEUP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)159989
GTEX Portal (Tissue expression)DEUP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ05D60   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ05D60  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ05D60
Splice isoforms : SwissVarQ05D60
PhosPhoSitePlusQ05D60
Domains : Interpro (EBI)Cep63/Deup1_N    Deup1   
Domain families : Pfam (Sanger)CEP63 (PF17045)   
Domain families : Pfam (NCBI)pfam17045   
Conserved Domain (NCBI)DEUP1
DMDM Disease mutations159989
Blocks (Seattle)DEUP1
SuperfamilyQ05D60
Human Protein AtlasENSG00000165325
Peptide AtlasQ05D60
HPRD08689
IPIIPI00479163   IPI00981382   IPI00978329   IPI00975913   IPI00977092   IPI00329024   IPI00977770   IPI00979007   IPI00980173   
Protein Interaction databases
DIP (DOE-UCLA)Q05D60
IntAct (EBI)Q05D60
FunCoupENSG00000165325
BioGRIDDEUP1
STRING (EMBL)DEUP1
ZODIACDEUP1
Ontologies - Pathways
QuickGOQ05D60
Ontology : AmiGOprotein binding  centriole  centriole replication  cell projection organization  de novo centriole assembly involved in multi-ciliated epithelial cell differentiation  de novo centriole assembly involved in multi-ciliated epithelial cell differentiation  deuterosome  deuterosome  multi-ciliated epithelial cell differentiation  
Ontology : EGO-EBIprotein binding  centriole  centriole replication  cell projection organization  de novo centriole assembly involved in multi-ciliated epithelial cell differentiation  de novo centriole assembly involved in multi-ciliated epithelial cell differentiation  deuterosome  deuterosome  multi-ciliated epithelial cell differentiation  
NDEx NetworkDEUP1
Atlas of Cancer Signalling NetworkDEUP1
Wikipedia pathwaysDEUP1
Orthology - Evolution
OrthoDB159989
GeneTree (enSembl)ENSG00000165325
Phylogenetic Trees/Animal Genes : TreeFamDEUP1
HOVERGENQ05D60
HOGENOMQ05D60
Homologs : HomoloGeneDEUP1
Homology/Alignments : Family Browser (UCSC)DEUP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDEUP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DEUP1
dbVarDEUP1
ClinVarDEUP1
1000_GenomesDEUP1 
Exome Variant ServerDEUP1
ExAC (Exome Aggregation Consortium)DEUP1 (select the gene name)
Genetic variants : HAPMAP159989
Genomic Variants (DGV)DEUP1 [DGVbeta]
DECIPHERDEUP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDEUP1 
Mutations
ICGC Data PortalDEUP1 
TCGA Data PortalDEUP1 
Broad Tumor PortalDEUP1
OASIS PortalDEUP1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDDEUP1
BioMutasearch DEUP1
DgiDB (Drug Gene Interaction Database)DEUP1
DoCM (Curated mutations)DEUP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DEUP1 (select a term)
intoGenDEUP1
Cancer3DDEUP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617148   
Orphanet
MedgenDEUP1
Genetic Testing Registry DEUP1
NextProtQ05D60 [Medical]
TSGene159989
GENETestsDEUP1
Huge Navigator DEUP1 [HugePedia]
snp3D : Map Gene to Disease159989
BioCentury BCIQDEUP1
ClinGenDEUP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD159989
Chemical/Pharm GKB GenePA143485419
Clinical trialDEUP1
Miscellaneous
canSAR (ICR)DEUP1 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDEUP1
EVEXDEUP1
GoPubMedDEUP1
iHOPDEUP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:13:09 CEST 2017

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