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DEXI (Dexi homolog)

Identity

Alias_namesDexi homolog (mouse)
Alias_symbol (synonym)MYLE
Other alias
HGNC (Hugo) DEXI
LocusID (NCBI) 28955
Atlas_Id 52568
Location 16p13.13  [Link to chromosome band 16p13]
Location_base_pair Starts at 10928891 and ends at 10942400 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CDH1 (16q22.1) / DEXI (16p13.13)CELSR3 (3p21.31) / DEXI (16p13.13)DEXI (16p13.13) / CELSR3 (3p21.31)
DEXI (16p13.13) / IL2 (4q27)DEXI (16p13.13) / PSMB3 (17q12)CDH1 16q22.1 / DEXI 16p13.13

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DEXI   13267
Cards
Entrez_Gene (NCBI)DEXI  28955  Dexi homolog
AliasesMYLE
GeneCards (Weizmann)DEXI
Ensembl hg19 (Hinxton)ENSG00000182108 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182108 [Gene_View]  chr16:10928891-10942400 [Contig_View]  DEXI [Vega]
ICGC DataPortalENSG00000182108
TCGA cBioPortalDEXI
AceView (NCBI)DEXI
Genatlas (Paris)DEXI
WikiGenes28955
SOURCE (Princeton)DEXI
Genetics Home Reference (NIH)DEXI
Genomic and cartography
GoldenPath hg38 (UCSC)DEXI  -     chr16:10928891-10942400 -  16p13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DEXI  -     16p13.13   [Description]    (hg19-Feb_2009)
EnsemblDEXI - 16p13.13 [CytoView hg19]  DEXI - 16p13.13 [CytoView hg38]
Mapping of homologs : NCBIDEXI [Mapview hg19]  DEXI [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF108145 AF129929 AK314111 BC001083 BC037569
RefSeq transcript (Entrez)NM_014015
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DEXI
Cluster EST : UnigeneHs.659355 [ NCBI ]
CGAP (NCI)Hs.659355
Alternative Splicing GalleryENSG00000182108
Gene ExpressionDEXI [ NCBI-GEO ]   DEXI [ EBI - ARRAY_EXPRESS ]   DEXI [ SEEK ]   DEXI [ MEM ]
Gene Expression Viewer (FireBrowse)DEXI [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)28955
GTEX Portal (Tissue expression)DEXI
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95424   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95424  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95424
Splice isoforms : SwissVarO95424
PhosPhoSitePlusO95424
Domains : Interpro (EBI)Dexamethasone-induced   
Domain families : Pfam (Sanger)Dexa_ind (PF15198)   
Domain families : Pfam (NCBI)pfam15198   
Domain structure : Prodom (Prabi Lyon)Dexamethasone-induced (PD195637)   
Conserved Domain (NCBI)DEXI
DMDM Disease mutations28955
Blocks (Seattle)DEXI
SuperfamilyO95424
Human Protein AtlasENSG00000182108
Peptide AtlasO95424
HPRD16798
IPIIPI00030689   
Protein Interaction databases
DIP (DOE-UCLA)O95424
IntAct (EBI)O95424
FunCoupENSG00000182108
BioGRIDDEXI
STRING (EMBL)DEXI
ZODIACDEXI
Ontologies - Pathways
QuickGOO95424
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkDEXI
Atlas of Cancer Signalling NetworkDEXI
Wikipedia pathwaysDEXI
Orthology - Evolution
OrthoDB28955
GeneTree (enSembl)ENSG00000182108
Phylogenetic Trees/Animal Genes : TreeFamDEXI
HOVERGENO95424
HOGENOMO95424
Homologs : HomoloGeneDEXI
Homology/Alignments : Family Browser (UCSC)DEXI
Gene fusions - Rearrangements
Fusion : MitelmanCDH1/DEXI [16q22.1/16p13.13]  [t(16;16)(p13;q22)]  
Fusion: TCGACDH1 16q22.1 DEXI 16p13.13 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDEXI [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DEXI
dbVarDEXI
ClinVarDEXI
1000_GenomesDEXI 
Exome Variant ServerDEXI
ExAC (Exome Aggregation Consortium)DEXI (select the gene name)
Genetic variants : HAPMAP28955
Genomic Variants (DGV)DEXI [DGVbeta]
DECIPHERDEXI [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDEXI 
Mutations
ICGC Data PortalDEXI 
TCGA Data PortalDEXI 
Broad Tumor PortalDEXI
OASIS PortalDEXI [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDEXI  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDEXI
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DEXI
DgiDB (Drug Gene Interaction Database)DEXI
DoCM (Curated mutations)DEXI (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DEXI (select a term)
intoGenDEXI
Cancer3DDEXI(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDEXI
Genetic Testing Registry DEXI
NextProtO95424 [Medical]
TSGene28955
GENETestsDEXI
Target ValidationDEXI
Huge Navigator DEXI [HugePedia]
snp3D : Map Gene to Disease28955
BioCentury BCIQDEXI
ClinGenDEXI
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28955
Chemical/Pharm GKB GenePA165449964
Clinical trialDEXI
Miscellaneous
canSAR (ICR)DEXI (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDEXI
EVEXDEXI
GoPubMedDEXI
iHOPDEXI
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:31:02 CEST 2017

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