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DGAT2L6 (diacylglycerol O-acyltransferase 2 like 6)

Identity

Alias_symbol (synonym)DC3
FLJ25989
Other alias
HGNC (Hugo) DGAT2L6
LocusID (NCBI) 347516
Atlas_Id 62446
Location Xq13.1  [Link to chromosome band Xq13]
Location_base_pair Starts at 70177483 and ends at 70205703 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DGAT2L6   23250
Cards
Entrez_Gene (NCBI)DGAT2L6  347516  diacylglycerol O-acyltransferase 2 like 6
AliasesDC3
GeneCards (Weizmann)DGAT2L6
Ensembl hg19 (Hinxton)ENSG00000184210 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184210 [Gene_View]  chrX:70177483-70205703 [Contig_View]  DGAT2L6 [Vega]
ICGC DataPortalENSG00000184210
TCGA cBioPortalDGAT2L6
AceView (NCBI)DGAT2L6
Genatlas (Paris)DGAT2L6
WikiGenes347516
SOURCE (Princeton)DGAT2L6
Genetics Home Reference (NIH)DGAT2L6
Genomic and cartography
GoldenPath hg38 (UCSC)DGAT2L6  -     chrX:70177483-70205703 +  Xq13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DGAT2L6  -     Xq13.1   [Description]    (hg19-Feb_2009)
EnsemblDGAT2L6 - Xq13.1 [CytoView hg19]  DGAT2L6 - Xq13.1 [CytoView hg38]
Mapping of homologs : NCBIDGAT2L6 [Mapview hg19]  DGAT2L6 [Mapview hg38]
OMIM300926   
Gene and transcription
Genbank (Entrez)AK129500 BC172336 BG696880 BG739793 BN000157
RefSeq transcript (Entrez)NM_198512
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DGAT2L6
Cluster EST : UnigeneHs.454355 [ NCBI ]
CGAP (NCI)Hs.454355
Alternative Splicing GalleryENSG00000184210
Gene ExpressionDGAT2L6 [ NCBI-GEO ]   DGAT2L6 [ EBI - ARRAY_EXPRESS ]   DGAT2L6 [ SEEK ]   DGAT2L6 [ MEM ]
Gene Expression Viewer (FireBrowse)DGAT2L6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)347516
GTEX Portal (Tissue expression)DGAT2L6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZPD8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZPD8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZPD8
Splice isoforms : SwissVarQ6ZPD8
Catalytic activity : Enzyme2.3.1.- [ Enzyme-Expasy ]   2.3.1.-2.3.1.- [ IntEnz-EBI ]   2.3.1.- [ BRENDA ]   2.3.1.- [ KEGG ]   
PhosPhoSitePlusQ6ZPD8
Domains : Interpro (EBI)DAGAT   
Domain families : Pfam (Sanger)DAGAT (PF03982)   
Domain families : Pfam (NCBI)pfam03982   
Conserved Domain (NCBI)DGAT2L6
DMDM Disease mutations347516
Blocks (Seattle)DGAT2L6
SuperfamilyQ6ZPD8
Human Protein AtlasENSG00000184210
Peptide AtlasQ6ZPD8
HPRD13141
IPIIPI00232895   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZPD8
IntAct (EBI)Q6ZPD8
FunCoupENSG00000184210
BioGRIDDGAT2L6
STRING (EMBL)DGAT2L6
ZODIACDGAT2L6
Ontologies - Pathways
QuickGOQ6ZPD8
Ontology : AmiGOdiacylglycerol O-acyltransferase activity  endoplasmic reticulum membrane  integral component of membrane  acylglycerol acyl-chain remodeling  
Ontology : EGO-EBIdiacylglycerol O-acyltransferase activity  endoplasmic reticulum membrane  integral component of membrane  acylglycerol acyl-chain remodeling  
NDEx NetworkDGAT2L6
Atlas of Cancer Signalling NetworkDGAT2L6
Wikipedia pathwaysDGAT2L6
Orthology - Evolution
OrthoDB347516
GeneTree (enSembl)ENSG00000184210
Phylogenetic Trees/Animal Genes : TreeFamDGAT2L6
HOVERGENQ6ZPD8
HOGENOMQ6ZPD8
Homologs : HomoloGeneDGAT2L6
Homology/Alignments : Family Browser (UCSC)DGAT2L6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDGAT2L6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DGAT2L6
dbVarDGAT2L6
ClinVarDGAT2L6
1000_GenomesDGAT2L6 
Exome Variant ServerDGAT2L6
ExAC (Exome Aggregation Consortium)DGAT2L6 (select the gene name)
Genetic variants : HAPMAP347516
Genomic Variants (DGV)DGAT2L6 [DGVbeta]
DECIPHERDGAT2L6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDGAT2L6 
Mutations
ICGC Data PortalDGAT2L6 
TCGA Data PortalDGAT2L6 
Broad Tumor PortalDGAT2L6
OASIS PortalDGAT2L6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDGAT2L6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDGAT2L6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DGAT2L6
DgiDB (Drug Gene Interaction Database)DGAT2L6
DoCM (Curated mutations)DGAT2L6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DGAT2L6 (select a term)
intoGenDGAT2L6
Cancer3DDGAT2L6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300926   
Orphanet
MedgenDGAT2L6
Genetic Testing Registry DGAT2L6
NextProtQ6ZPD8 [Medical]
TSGene347516
GENETestsDGAT2L6
Target ValidationDGAT2L6
Huge Navigator DGAT2L6 [HugePedia]
snp3D : Map Gene to Disease347516
BioCentury BCIQDGAT2L6
ClinGenDGAT2L6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD347516
Chemical/Pharm GKB GenePA143485448
Clinical trialDGAT2L6
Miscellaneous
canSAR (ICR)DGAT2L6 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDGAT2L6
EVEXDGAT2L6
GoPubMedDGAT2L6
iHOPDGAT2L6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:45:46 CEST 2017

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