Atlas of Genetics and Cytogenetics in Oncology and Haematology

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DGCR8 (DGCR8 microprocessor complex subunit)

Identity

Alias (NCBI)C22orf12
DGCRK6
Gy1
pasha
HGNC (Hugo) DGCR8
HGNC Alias symbDGCRK6
Gy1
pasha
HGNC Previous nameC22orf12
HGNC Previous namechromosome 22 open reading frame 12
 DiGeorge syndrome critical region gene 8
 DGCR8, microprocessor complex subunit
LocusID (NCBI) 54487
Atlas_Id 53138
Location 22q11.21  [Link to chromosome band 22q11]
Location_base_pair Starts at 20080241 and ends at 20111872 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CDKL5 (Xp22.13) / DGCR8 (22q11.21)DEFA1 (8p23.1) / DGCR8 (22q11.21)DGCR8 (22q11.21) / CRKL (22q11.21)
DGCR8 (22q11.21) / SGSM1 (22q11.23)WNT7B (22q13.31) / DGCR8 (22q11.21)DGCR8 22q11.21 / CRKL 22q11.21
DGCR8 22q11.21 / SGSM1 22q11.23WNT7B 22q13.31 / DGCR8 22q11.21

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)DGCR8   2847
Cards
Entrez_Gene (NCBI)DGCR8    DGCR8 microprocessor complex subunit
AliasesC22orf12; DGCRK6; Gy1; pasha
GeneCards (Weizmann)DGCR8
Ensembl hg19 (Hinxton)ENSG00000128191 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000128191 [Gene_View]  ENSG00000128191 [Sequence]  chr22:20080241-20111872 [Contig_View]  DGCR8 [Vega]
ICGC DataPortalENSG00000128191
TCGA cBioPortalDGCR8
AceView (NCBI)DGCR8
Genatlas (Paris)DGCR8
SOURCE (Princeton)DGCR8
Genetics Home Reference (NIH)DGCR8
Genomic and cartography
GoldenPath hg38 (UCSC)DGCR8  -     chr22:20080241-20111872 +  22q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DGCR8  -     22q11.21   [Description]    (hg19-Feb_2009)
GoldenPathDGCR8 - 22q11.21 [CytoView hg19]  DGCR8 - 22q11.21 [CytoView hg38]
ImmunoBaseENSG00000128191
genome Data Viewer NCBIDGCR8 [Mapview hg19]  
OMIM192430   609030   
Gene and transcription
Genbank (Entrez)AA737782 AF165527 AK025427 AK025539 AK025780
RefSeq transcript (Entrez)NM_001190326 NM_022720
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DGCR8
Alternative Splicing GalleryENSG00000128191
Gene ExpressionDGCR8 [ NCBI-GEO ]   DGCR8 [ EBI - ARRAY_EXPRESS ]   DGCR8 [ SEEK ]   DGCR8 [ MEM ]
Gene Expression Viewer (FireBrowse)DGCR8 [ Firebrowse - Broad ]
GenevisibleExpression of DGCR8 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54487
GTEX Portal (Tissue expression)DGCR8
Human Protein AtlasENSG00000128191-DGCR8 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DGCR8
Blocks (Seattle)DGCR8
Human Protein Atlas [tissue]ENSG00000128191-DGCR8 [tissue]
HPRD09913
IPIIPI00165970   IPI00216207   IPI00549380   IPI00953279   
Protein Interaction databases
BioGRIDDGCR8
STRING (EMBL)DGCR8
ZODIACDGCR8
Ontologies - Pathways
Litterature
PubMed109 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXDGCR8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 25 19:18:22 CET 2021
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