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DHRS11 (dehydrogenase/reductase (SDR family) member 11)

Identity

Alias_namesdehydrogenase/reductase (SDR family) member 11
Alias_symbol (synonym)MGC4172
SDR24C1
Other aliasARPG836
HGNC (Hugo) DHRS11
LocusID (NCBI) 79154
Atlas_Id 62465
Location 17q12  [Link to chromosome band 17q12]
Location_base_pair Starts at 34948226 and ends at 34957233 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ANKRD27 (19q13.11) / DHRS11 (17q12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DHRS11   28639
Cards
Entrez_Gene (NCBI)DHRS11  79154  dehydrogenase/reductase (SDR family) member 11
AliasesARPG836; SDR24C1
GeneCards (Weizmann)DHRS11
Ensembl hg19 (Hinxton)ENSG00000278535 [Gene_View]  chr17:34948226-34957233 [Contig_View]  DHRS11 [Vega]
Ensembl hg38 (Hinxton)ENSG00000278535 [Gene_View]  chr17:34948226-34957233 [Contig_View]  DHRS11 [Vega]
ICGC DataPortalENSG00000278535
TCGA cBioPortalDHRS11
AceView (NCBI)DHRS11
Genatlas (Paris)DHRS11
WikiGenes79154
SOURCE (Princeton)DHRS11
Genetics Home Reference (NIH)DHRS11
Genomic and cartography
GoldenPath hg19 (UCSC)DHRS11  -     chr17:34948226-34957233 +  17q12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DHRS11  -     17q12   [Description]    (hg38-Dec_2013)
EnsemblDHRS11 - 17q12 [CytoView hg19]  DHRS11 - 17q12 [CytoView hg38]
Mapping of homologs : NCBIDHRS11 [Mapview hg19]  DHRS11 [Mapview hg38]
OMIM616159   
Gene and transcription
Genbank (Entrez)AB209247 AK026196 AK096551 AK315735 AY358712
RefSeq transcript (Entrez)NM_024308
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NT_187614 NW_004929407
Consensus coding sequences : CCDS (NCBI)DHRS11
Cluster EST : UnigeneHs.462859 [ NCBI ]
CGAP (NCI)Hs.462859
Alternative Splicing GalleryENSG00000278535
Gene ExpressionDHRS11 [ NCBI-GEO ]   DHRS11 [ EBI - ARRAY_EXPRESS ]   DHRS11 [ SEEK ]   DHRS11 [ MEM ]
Gene Expression Viewer (FireBrowse)DHRS11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79154
GTEX Portal (Tissue expression)DHRS11
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UWP2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UWP2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UWP2
Splice isoforms : SwissVarQ6UWP2
Catalytic activity : Enzyme1.1.-.- [ Enzyme-Expasy ]   1.1.-.-1.1.-.- [ IntEnz-EBI ]   1.1.-.- [ BRENDA ]   1.1.-.- [ KEGG ]   
PhosPhoSitePlusQ6UWP2
Domaine pattern : Prosite (Expaxy)ADH_SHORT (PS00061)   
Domains : Interpro (EBI)DH_sc/Rdtase_SDR    Glc/ribitol_DH    NAD(P)-bd_dom    Sc_DH/Rdtase_CS   
Domain families : Pfam (Sanger)adh_short (PF00106)   
Domain families : Pfam (NCBI)pfam00106   
Conserved Domain (NCBI)DHRS11
DMDM Disease mutations79154
Blocks (Seattle)DHRS11
PDB (SRS)1XG5   
PDB (PDBSum)1XG5   
PDB (IMB)1XG5   
PDB (RSDB)1XG5   
Structural Biology KnowledgeBase1XG5   
SCOP (Structural Classification of Proteins)1XG5   
CATH (Classification of proteins structures)1XG5   
SuperfamilyQ6UWP2
Human Protein AtlasENSG00000278535
Peptide AtlasQ6UWP2
HPRD08331
IPIIPI00034280   IPI00658011   IPI00556410   IPI00790844   
Protein Interaction databases
DIP (DOE-UCLA)Q6UWP2
IntAct (EBI)Q6UWP2
FunCoupENSG00000278535
BioGRIDDHRS11
STRING (EMBL)DHRS11
ZODIACDHRS11
Ontologies - Pathways
QuickGOQ6UWP2
Ontology : AmiGOextracellular region  oxidoreductase activity  oxidation-reduction process  
Ontology : EGO-EBIextracellular region  oxidoreductase activity  oxidation-reduction process  
NDEx NetworkDHRS11
Atlas of Cancer Signalling NetworkDHRS11
Wikipedia pathwaysDHRS11
Orthology - Evolution
OrthoDB79154
GeneTree (enSembl)ENSG00000278535
Phylogenetic Trees/Animal Genes : TreeFamDHRS11
HOVERGENQ6UWP2
HOGENOMQ6UWP2
Homologs : HomoloGeneDHRS11
Homology/Alignments : Family Browser (UCSC)DHRS11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDHRS11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DHRS11
dbVarDHRS11
ClinVarDHRS11
1000_GenomesDHRS11 
Exome Variant ServerDHRS11
ExAC (Exome Aggregation Consortium)DHRS11 (select the gene name)
Genetic variants : HAPMAP79154
Genomic Variants (DGV)DHRS11 [DGVbeta]
DECIPHER (Syndromes)17:34948226-34957233  ENSG00000278535
CONAN: Copy Number AnalysisDHRS11 
Mutations
ICGC Data PortalDHRS11 
TCGA Data PortalDHRS11 
Broad Tumor PortalDHRS11
OASIS PortalDHRS11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDHRS11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDHRS11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DHRS11
DgiDB (Drug Gene Interaction Database)DHRS11
DoCM (Curated mutations)DHRS11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DHRS11 (select a term)
intoGenDHRS11
Cancer3DDHRS11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616159   
Orphanet
MedgenDHRS11
Genetic Testing Registry DHRS11
NextProtQ6UWP2 [Medical]
TSGene79154
GENETestsDHRS11
Huge Navigator DHRS11 [HugePedia]
snp3D : Map Gene to Disease79154
BioCentury BCIQDHRS11
ClinGenDHRS11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79154
Chemical/Pharm GKB GenePA164718841
Clinical trialDHRS11
Miscellaneous
canSAR (ICR)DHRS11 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDHRS11
EVEXDHRS11
GoPubMedDHRS11
iHOPDHRS11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:01:37 CET 2017

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