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DHRS12 (dehydrogenase/reductase 12)

Identity

Alias_namesdehydrogenase/reductase (SDR family) member 12
Alias_symbol (synonym)FLJ13639
SDR40C1
Other alias
HGNC (Hugo) DHRS12
LocusID (NCBI) 79758
Atlas_Id 62466
Location 13q14.3  [Link to chromosome band 13q14]
Location_base_pair Starts at 51770777 and ends at 51804162 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DHRS12 (13q14.3) / BCL2 (18q21.33)DHRS12 (13q14.3) / LYAR (4p16.3)DHRS12 (13q14.3) / RASL11A (13q12.2)
RASL11A (13q12.2) / DHRS12 (13q14.3)SLC25A24 (1p13.3) / DHRS12 (13q14.3)RASL11A DHRS12
SLC25A24 DHRS12

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DHRS12   25832
Cards
Entrez_Gene (NCBI)DHRS12  79758  dehydrogenase/reductase 12
AliasesSDR40C1
GeneCards (Weizmann)DHRS12
Ensembl hg19 (Hinxton)ENSG00000102796 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000102796 [Gene_View]  chr13:51770777-51804162 [Contig_View]  DHRS12 [Vega]
ICGC DataPortalENSG00000102796
TCGA cBioPortalDHRS12
AceView (NCBI)DHRS12
Genatlas (Paris)DHRS12
WikiGenes79758
SOURCE (Princeton)DHRS12
Genetics Home Reference (NIH)DHRS12
Genomic and cartography
GoldenPath hg38 (UCSC)DHRS12  -     chr13:51770777-51804162 -  13q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DHRS12  -     13q14.3   [Description]    (hg19-Feb_2009)
EnsemblDHRS12 - 13q14.3 [CytoView hg19]  DHRS12 - 13q14.3 [CytoView hg38]
Mapping of homologs : NCBIDHRS12 [Mapview hg19]  DHRS12 [Mapview hg38]
OMIM616163   
Gene and transcription
Genbank (Entrez)AA831151 AK023701 BC009825 BC026024 DB481446
RefSeq transcript (Entrez)NM_001031719 NM_001270424 NM_024705
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DHRS12
Cluster EST : UnigeneHs.266728 [ NCBI ]
CGAP (NCI)Hs.266728
Alternative Splicing GalleryENSG00000102796
Gene ExpressionDHRS12 [ NCBI-GEO ]   DHRS12 [ EBI - ARRAY_EXPRESS ]   DHRS12 [ SEEK ]   DHRS12 [ MEM ]
Gene Expression Viewer (FireBrowse)DHRS12 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79758
GTEX Portal (Tissue expression)DHRS12
Protein : pattern, domain, 3D structure
UniProt/SwissProtA0PJE2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA0PJE2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA0PJE2
Splice isoforms : SwissVarA0PJE2
Catalytic activity : Enzyme1.1.-.- [ Enzyme-Expasy ]   1.1.-.-1.1.-.- [ IntEnz-EBI ]   1.1.-.- [ BRENDA ]   1.1.-.- [ KEGG ]   
PhosPhoSitePlusA0PJE2
Domains : Interpro (EBI)NAD(P)-bd_dom    SDR_fam   
Domain families : Pfam (Sanger)adh_short (PF00106)   
Domain families : Pfam (NCBI)pfam00106   
Conserved Domain (NCBI)DHRS12
DMDM Disease mutations79758
Blocks (Seattle)DHRS12
SuperfamilyA0PJE2
Human Protein AtlasENSG00000102796
Peptide AtlasA0PJE2
HPRD07833
IPIIPI00877089   IPI00003025   IPI00062441   
Protein Interaction databases
DIP (DOE-UCLA)A0PJE2
IntAct (EBI)A0PJE2
FunCoupENSG00000102796
BioGRIDDHRS12
STRING (EMBL)DHRS12
ZODIACDHRS12
Ontologies - Pathways
QuickGOA0PJE2
Ontology : AmiGOoxidoreductase activity  oxidation-reduction process  
Ontology : EGO-EBIoxidoreductase activity  oxidation-reduction process  
NDEx NetworkDHRS12
Atlas of Cancer Signalling NetworkDHRS12
Wikipedia pathwaysDHRS12
Orthology - Evolution
OrthoDB79758
GeneTree (enSembl)ENSG00000102796
Phylogenetic Trees/Animal Genes : TreeFamDHRS12
HOVERGENA0PJE2
HOGENOMA0PJE2
Homologs : HomoloGeneDHRS12
Homology/Alignments : Family Browser (UCSC)DHRS12
Gene fusions - Rearrangements
Fusion: TCGARASL11A DHRS12
Fusion: TCGASLC25A24 DHRS12
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDHRS12 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DHRS12
dbVarDHRS12
ClinVarDHRS12
1000_GenomesDHRS12 
Exome Variant ServerDHRS12
ExAC (Exome Aggregation Consortium)DHRS12 (select the gene name)
Genetic variants : HAPMAP79758
Genomic Variants (DGV)DHRS12 [DGVbeta]
DECIPHERDHRS12 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDHRS12 
Mutations
ICGC Data PortalDHRS12 
TCGA Data PortalDHRS12 
Broad Tumor PortalDHRS12
OASIS PortalDHRS12 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDHRS12  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDHRS12
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DHRS12
DgiDB (Drug Gene Interaction Database)DHRS12
DoCM (Curated mutations)DHRS12 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DHRS12 (select a term)
intoGenDHRS12
Cancer3DDHRS12(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616163   
Orphanet
MedgenDHRS12
Genetic Testing Registry DHRS12
NextProtA0PJE2 [Medical]
TSGene79758
GENETestsDHRS12
Target ValidationDHRS12
Huge Navigator DHRS12 [HugePedia]
snp3D : Map Gene to Disease79758
BioCentury BCIQDHRS12
ClinGenDHRS12
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79758
Chemical/Pharm GKB GenePA147358124
Clinical trialDHRS12
Miscellaneous
canSAR (ICR)DHRS12 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDHRS12
EVEXDHRS12
GoPubMedDHRS12
iHOPDHRS12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:45:51 CEST 2017

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