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DHRS13 (dehydrogenase/reductase 13)

Identity

Alias_namesdehydrogenase/reductase (SDR family) member 13
Alias_symbol (synonym)MGC23280
SDR7C5
Other alias
HGNC (Hugo) DHRS13
LocusID (NCBI) 147015
Atlas_Id 62467
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 28897781 and ends at 28903071 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DHRS13 (17q11.2) / FLOT2 (17q11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DHRS13   28326
Cards
Entrez_Gene (NCBI)DHRS13  147015  dehydrogenase/reductase 13
AliasesSDR7C5
GeneCards (Weizmann)DHRS13
Ensembl hg19 (Hinxton)ENSG00000167536 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167536 [Gene_View]  chr17:28897781-28903071 [Contig_View]  DHRS13 [Vega]
ICGC DataPortalENSG00000167536
TCGA cBioPortalDHRS13
AceView (NCBI)DHRS13
Genatlas (Paris)DHRS13
WikiGenes147015
SOURCE (Princeton)DHRS13
Genetics Home Reference (NIH)DHRS13
Genomic and cartography
GoldenPath hg38 (UCSC)DHRS13  -     chr17:28897781-28903071 -  17q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DHRS13  -     17q11.2   [Description]    (hg19-Feb_2009)
EnsemblDHRS13 - 17q11.2 [CytoView hg19]  DHRS13 - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBIDHRS13 [Mapview hg19]  DHRS13 [Mapview hg38]
OMIM616157   
Gene and transcription
Genbank (Entrez)AK296017 AY358566 BC015582 BQ052759
RefSeq transcript (Entrez)NM_144683
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DHRS13
Cluster EST : UnigeneHs.631760 [ NCBI ]
CGAP (NCI)Hs.631760
Alternative Splicing GalleryENSG00000167536
Gene ExpressionDHRS13 [ NCBI-GEO ]   DHRS13 [ EBI - ARRAY_EXPRESS ]   DHRS13 [ SEEK ]   DHRS13 [ MEM ]
Gene Expression Viewer (FireBrowse)DHRS13 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)147015
GTEX Portal (Tissue expression)DHRS13
Human Protein AtlasENSG00000167536-DHRS13 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UX07   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UX07  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UX07
Splice isoforms : SwissVarQ6UX07
Catalytic activity : Enzyme1.1.-.- [ Enzyme-Expasy ]   1.1.-.-1.1.-.- [ IntEnz-EBI ]   1.1.-.- [ BRENDA ]   1.1.-.- [ KEGG ]   
PhosPhoSitePlusQ6UX07
Domains : Interpro (EBI)NAD(P)-bd_dom    SDR_fam   
Domain families : Pfam (Sanger)adh_short (PF00106)   
Domain families : Pfam (NCBI)pfam00106   
Conserved Domain (NCBI)DHRS13
DMDM Disease mutations147015
Blocks (Seattle)DHRS13
SuperfamilyQ6UX07
Human Protein Atlas [tissue]ENSG00000167536-DHRS13 [tissue]
Peptide AtlasQ6UX07
HPRD14488
IPIIPI00059955   IPI00746067   IPI00910665   
Protein Interaction databases
DIP (DOE-UCLA)Q6UX07
IntAct (EBI)Q6UX07
FunCoupENSG00000167536
BioGRIDDHRS13
STRING (EMBL)DHRS13
ZODIACDHRS13
Ontologies - Pathways
QuickGOQ6UX07
Ontology : AmiGOextracellular region  membrane  oxidoreductase activity  oxidation-reduction process  
Ontology : EGO-EBIextracellular region  membrane  oxidoreductase activity  oxidation-reduction process  
NDEx NetworkDHRS13
Atlas of Cancer Signalling NetworkDHRS13
Wikipedia pathwaysDHRS13
Orthology - Evolution
OrthoDB147015
GeneTree (enSembl)ENSG00000167536
Phylogenetic Trees/Animal Genes : TreeFamDHRS13
HOVERGENQ6UX07
HOGENOMQ6UX07
Homologs : HomoloGeneDHRS13
Homology/Alignments : Family Browser (UCSC)DHRS13
Gene fusions - Rearrangements
Fusion: Tumor Portal DHRS13
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDHRS13 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DHRS13
dbVarDHRS13
ClinVarDHRS13
1000_GenomesDHRS13 
Exome Variant ServerDHRS13
ExAC (Exome Aggregation Consortium)ENSG00000167536
GNOMAD BrowserENSG00000167536
Genetic variants : HAPMAP147015
Genomic Variants (DGV)DHRS13 [DGVbeta]
DECIPHERDHRS13 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDHRS13 
Mutations
ICGC Data PortalDHRS13 
TCGA Data PortalDHRS13 
Broad Tumor PortalDHRS13
OASIS PortalDHRS13 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDHRS13  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDHRS13
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DHRS13
DgiDB (Drug Gene Interaction Database)DHRS13
DoCM (Curated mutations)DHRS13 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DHRS13 (select a term)
intoGenDHRS13
Cancer3DDHRS13(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616157   
Orphanet
MedgenDHRS13
Genetic Testing Registry DHRS13
NextProtQ6UX07 [Medical]
TSGene147015
GENETestsDHRS13
Target ValidationDHRS13
Huge Navigator DHRS13 [HugePedia]
snp3D : Map Gene to Disease147015
BioCentury BCIQDHRS13
ClinGenDHRS13
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD147015
Chemical/Pharm GKB GenePA147358144
Clinical trialDHRS13
Miscellaneous
canSAR (ICR)DHRS13 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDHRS13
EVEXDHRS13
GoPubMedDHRS13
iHOPDHRS13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:44:34 CET 2017

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