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DHRS4L1 (dehydrogenase/reductase 4 like 1)

Identity

Alias_namesdehydrogenase/reductase (SDR family) member 4 like 1
Alias_symbol (synonym)SDR25C4
Other alias
HGNC (Hugo) DHRS4L1
LocusID (NCBI) 728635
Atlas_Id 62469
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 24007009 and ends at 24051377 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DHRS4L1   19732
Cards
Entrez_Gene (NCBI)DHRS4L1  728635  dehydrogenase/reductase 4 like 1
AliasesSDR25C4
GeneCards (Weizmann)DHRS4L1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:24007009-24051377 [Contig_View]  DHRS4L1 [Vega]
TCGA cBioPortalDHRS4L1
AceView (NCBI)DHRS4L1
Genatlas (Paris)DHRS4L1
WikiGenes728635
SOURCE (Princeton)DHRS4L1
Genetics Home Reference (NIH)DHRS4L1
Genomic and cartography
GoldenPath hg38 (UCSC)DHRS4L1  -     chr14:24007009-24051377 +  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DHRS4L1  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblDHRS4L1 - 14q11.2 [CytoView hg19]  DHRS4L1 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIDHRS4L1 [Mapview hg19]  DHRS4L1 [Mapview hg38]
OMIM615195   
Gene and transcription
Genbank (Entrez)BC171914 BC171918 DA776573 GQ871921 GQ871922
RefSeq transcript (Entrez)NM_001082488 NM_001277864
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DHRS4L1
Cluster EST : UnigeneHs.743442 [ NCBI ]
CGAP (NCI)Hs.743442
Gene ExpressionDHRS4L1 [ NCBI-GEO ]   DHRS4L1 [ EBI - ARRAY_EXPRESS ]   DHRS4L1 [ SEEK ]   DHRS4L1 [ MEM ]
Gene Expression Viewer (FireBrowse)DHRS4L1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728635
GTEX Portal (Tissue expression)DHRS4L1
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0CG22   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0CG22  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0CG22
Splice isoforms : SwissVarP0CG22
Catalytic activity : Enzyme1.1.-.- [ Enzyme-Expasy ]   1.1.-.-1.1.-.- [ IntEnz-EBI ]   1.1.-.- [ BRENDA ]   1.1.-.- [ KEGG ]   
PhosPhoSitePlusP0CG22
Domaine pattern : Prosite (Expaxy)ADH_SHORT (PS00061)   
Domains : Interpro (EBI)NAD(P)-bd_dom    Sc_DH/Rdtase_CS    SDR_fam   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DHRS4L1
DMDM Disease mutations728635
Blocks (Seattle)DHRS4L1
SuperfamilyP0CG22
Peptide AtlasP0CG22
IPIIPI00376025   
Protein Interaction databases
DIP (DOE-UCLA)P0CG22
IntAct (EBI)P0CG22
BioGRIDDHRS4L1
STRING (EMBL)DHRS4L1
ZODIACDHRS4L1
Ontologies - Pathways
QuickGOP0CG22
Ontology : AmiGOoxidoreductase activity  oxidation-reduction process  
Ontology : EGO-EBIoxidoreductase activity  oxidation-reduction process  
Pathways : KEGGRetinol metabolism    Peroxisome   
NDEx NetworkDHRS4L1
Atlas of Cancer Signalling NetworkDHRS4L1
Wikipedia pathwaysDHRS4L1
Orthology - Evolution
OrthoDB728635
Phylogenetic Trees/Animal Genes : TreeFamDHRS4L1
HOVERGENP0CG22
HOGENOMP0CG22
Homologs : HomoloGeneDHRS4L1
Homology/Alignments : Family Browser (UCSC)DHRS4L1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDHRS4L1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DHRS4L1
dbVarDHRS4L1
ClinVarDHRS4L1
1000_GenomesDHRS4L1 
Exome Variant ServerDHRS4L1
ExAC (Exome Aggregation Consortium)DHRS4L1 (select the gene name)
Genetic variants : HAPMAP728635
Genomic Variants (DGV)DHRS4L1 [DGVbeta]
DECIPHERDHRS4L1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDHRS4L1 
Mutations
ICGC Data PortalDHRS4L1 
TCGA Data PortalDHRS4L1 
Broad Tumor PortalDHRS4L1
OASIS PortalDHRS4L1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDDHRS4L1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DHRS4L1
DgiDB (Drug Gene Interaction Database)DHRS4L1
DoCM (Curated mutations)DHRS4L1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DHRS4L1 (select a term)
intoGenDHRS4L1
Cancer3DDHRS4L1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615195   
Orphanet
MedgenDHRS4L1
Genetic Testing Registry DHRS4L1
NextProtP0CG22 [Medical]
TSGene728635
GENETestsDHRS4L1
Target ValidationDHRS4L1
Huge Navigator DHRS4L1 [HugePedia]
snp3D : Map Gene to Disease728635
BioCentury BCIQDHRS4L1
ClinGenDHRS4L1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728635
Chemical/Pharm GKB GenePA134878665
Clinical trialDHRS4L1
Miscellaneous
canSAR (ICR)DHRS4L1 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDHRS4L1
EVEXDHRS4L1
GoPubMedDHRS4L1
iHOPDHRS4L1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:45:51 CEST 2017

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