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DHRS7 (dehydrogenase/reductase 7)

Identity

Alias_namesdehydrogenase/reductase (SDR family) member 7
Alias_symbol (synonym)retDSR4
SDR34C1
Other aliasCGI-86
retSDR4
HGNC (Hugo) DHRS7
LocusID (NCBI) 51635
Atlas_Id 62471
Location 14q23.1  [Link to chromosome band 14q23]
Location_base_pair Starts at 60144120 and ends at 60169864 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DHRS7 (14q23.1) / FAM120A (9q22.31)PDE9A (21q22.3) / DHRS7 (14q23.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DHRS7   21524
Cards
Entrez_Gene (NCBI)DHRS7  51635  dehydrogenase/reductase 7
AliasesCGI-86; SDR34C1; retDSR4; retSDR4
GeneCards (Weizmann)DHRS7
Ensembl hg19 (Hinxton)ENSG00000100612 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000100612 [Gene_View]  chr14:60144120-60169864 [Contig_View]  DHRS7 [Vega]
ICGC DataPortalENSG00000100612
TCGA cBioPortalDHRS7
AceView (NCBI)DHRS7
Genatlas (Paris)DHRS7
WikiGenes51635
SOURCE (Princeton)DHRS7
Genetics Home Reference (NIH)DHRS7
Genomic and cartography
GoldenPath hg38 (UCSC)DHRS7  -     chr14:60144120-60169864 -  14q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DHRS7  -     14q23.1   [Description]    (hg19-Feb_2009)
EnsemblDHRS7 - 14q23.1 [CytoView hg19]  DHRS7 - 14q23.1 [CytoView hg38]
Mapping of homologs : NCBIDHRS7 [Mapview hg19]  DHRS7 [Mapview hg38]
OMIM612833   
Gene and transcription
Genbank (Entrez)AF126782 AF151844 AK313285 AL117420 AW161450
RefSeq transcript (Entrez)NM_001322280 NM_001322281 NM_001322282 NM_016029
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DHRS7
Cluster EST : UnigeneHs.59719 [ NCBI ]
CGAP (NCI)Hs.59719
Alternative Splicing GalleryENSG00000100612
Gene ExpressionDHRS7 [ NCBI-GEO ]   DHRS7 [ EBI - ARRAY_EXPRESS ]   DHRS7 [ SEEK ]   DHRS7 [ MEM ]
Gene Expression Viewer (FireBrowse)DHRS7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51635
GTEX Portal (Tissue expression)DHRS7
Human Protein AtlasENSG00000100612-DHRS7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y394   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y394  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y394
Splice isoforms : SwissVarQ9Y394
Catalytic activity : Enzyme1.1.-.- [ Enzyme-Expasy ]   1.1.-.-1.1.-.- [ IntEnz-EBI ]   1.1.-.- [ BRENDA ]   1.1.-.- [ KEGG ]   
PhosPhoSitePlusQ9Y394
Domaine pattern : Prosite (Expaxy)ADH_SHORT (PS00061)   
Domains : Interpro (EBI)NAD(P)-bd_dom    Sc_DH/Rdtase_CS    SDR_fam   
Domain families : Pfam (Sanger)adh_short (PF00106)   
Domain families : Pfam (NCBI)pfam00106   
Conserved Domain (NCBI)DHRS7
DMDM Disease mutations51635
Blocks (Seattle)DHRS7
SuperfamilyQ9Y394
Human Protein Atlas [tissue]ENSG00000100612-DHRS7 [tissue]
Peptide AtlasQ9Y394
HPRD16802
IPIIPI00006957   IPI00339238   IPI00470418   IPI01026450   IPI01026582   IPI01026250   IPI01025922   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y394
IntAct (EBI)Q9Y394
FunCoupENSG00000100612
BioGRIDDHRS7
STRING (EMBL)DHRS7
ZODIACDHRS7
Ontologies - Pathways
QuickGOQ9Y394
Ontology : AmiGOmembrane  oxidoreductase activity  oxidation-reduction process  
Ontology : EGO-EBImembrane  oxidoreductase activity  oxidation-reduction process  
NDEx NetworkDHRS7
Atlas of Cancer Signalling NetworkDHRS7
Wikipedia pathwaysDHRS7
Orthology - Evolution
OrthoDB51635
GeneTree (enSembl)ENSG00000100612
Phylogenetic Trees/Animal Genes : TreeFamDHRS7
HOVERGENQ9Y394
HOGENOMQ9Y394
Homologs : HomoloGeneDHRS7
Homology/Alignments : Family Browser (UCSC)DHRS7
Gene fusions - Rearrangements
Tumor Fusion PortalDHRS7
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDHRS7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DHRS7
dbVarDHRS7
ClinVarDHRS7
1000_GenomesDHRS7 
Exome Variant ServerDHRS7
ExAC (Exome Aggregation Consortium)ENSG00000100612
GNOMAD BrowserENSG00000100612
Genetic variants : HAPMAP51635
Genomic Variants (DGV)DHRS7 [DGVbeta]
DECIPHERDHRS7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDHRS7 
Mutations
ICGC Data PortalDHRS7 
TCGA Data PortalDHRS7 
Broad Tumor PortalDHRS7
OASIS PortalDHRS7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDHRS7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDHRS7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DHRS7
DgiDB (Drug Gene Interaction Database)DHRS7
DoCM (Curated mutations)DHRS7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DHRS7 (select a term)
intoGenDHRS7
Cancer3DDHRS7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612833   
Orphanet
DisGeNETDHRS7
MedgenDHRS7
Genetic Testing Registry DHRS7
NextProtQ9Y394 [Medical]
TSGene51635
GENETestsDHRS7
Target ValidationDHRS7
Huge Navigator DHRS7 [HugePedia]
snp3D : Map Gene to Disease51635
BioCentury BCIQDHRS7
ClinGenDHRS7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51635
Chemical/Pharm GKB GenePA134974539
Clinical trialDHRS7
Miscellaneous
canSAR (ICR)DHRS7 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDHRS7
EVEXDHRS7
GoPubMedDHRS7
iHOPDHRS7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:29:23 CET 2017

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