Atlas of Genetics and Cytogenetics in Oncology and Haematology


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DHRS7C (dehydrogenase/reductase 7C)

Identity

Alias_namesdehydrogenase/reductase (SDR family) member 7C
Alias_symbol (synonym)SDR32C2
Other alias
HGNC (Hugo) DHRS7C
LocusID (NCBI) 201140
Atlas_Id 62473
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 9771434 and ends at 9791297 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DHRS7C   32423
Cards
Entrez_Gene (NCBI)DHRS7C  201140  dehydrogenase/reductase 7C
AliasesSDR32C2
GeneCards (Weizmann)DHRS7C
Ensembl hg19 (Hinxton)ENSG00000184544 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184544 [Gene_View]  chr17:9771434-9791297 [Contig_View]  DHRS7C [Vega]
ICGC DataPortalENSG00000184544
TCGA cBioPortalDHRS7C
AceView (NCBI)DHRS7C
Genatlas (Paris)DHRS7C
WikiGenes201140
SOURCE (Princeton)DHRS7C
Genetics Home Reference (NIH)DHRS7C
Genomic and cartography
GoldenPath hg38 (UCSC)DHRS7C  -     chr17:9771434-9791297 -  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DHRS7C  -     17p13.1   [Description]    (hg19-Feb_2009)
EnsemblDHRS7C - 17p13.1 [CytoView hg19]  DHRS7C - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBIDHRS7C [Mapview hg19]  DHRS7C [Mapview hg38]
OMIM616161   
Gene and transcription
Genbank (Entrez)AI091419 AI168267 BC147024 BC147025 BC171909
RefSeq transcript (Entrez)NM_001105571 NM_001220493
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DHRS7C
Cluster EST : UnigeneHs.61684 [ NCBI ]
CGAP (NCI)Hs.61684
Alternative Splicing GalleryENSG00000184544
Gene ExpressionDHRS7C [ NCBI-GEO ]   DHRS7C [ EBI - ARRAY_EXPRESS ]   DHRS7C [ SEEK ]   DHRS7C [ MEM ]
Gene Expression Viewer (FireBrowse)DHRS7C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)201140
GTEX Portal (Tissue expression)DHRS7C
Human Protein AtlasENSG00000184544-DHRS7C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NNS2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NNS2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NNS2
Splice isoforms : SwissVarA6NNS2
Catalytic activity : Enzyme1.1.-.- [ Enzyme-Expasy ]   1.1.-.-1.1.-.- [ IntEnz-EBI ]   1.1.-.- [ BRENDA ]   1.1.-.- [ KEGG ]   
PhosPhoSitePlusA6NNS2
Domaine pattern : Prosite (Expaxy)ADH_SHORT (PS00061)   
Domains : Interpro (EBI)NAD(P)-bd_dom    Sc_DH/Rdtase_CS    SDR_fam   
Domain families : Pfam (Sanger)adh_short (PF00106)   
Domain families : Pfam (NCBI)pfam00106   
Conserved Domain (NCBI)DHRS7C
DMDM Disease mutations201140
Blocks (Seattle)DHRS7C
SuperfamilyA6NNS2
Human Protein Atlas [tissue]ENSG00000184544-DHRS7C [tissue]
Peptide AtlasA6NNS2
IPIIPI00163114   
Protein Interaction databases
DIP (DOE-UCLA)A6NNS2
IntAct (EBI)A6NNS2
FunCoupENSG00000184544
BioGRIDDHRS7C
STRING (EMBL)DHRS7C
ZODIACDHRS7C
Ontologies - Pathways
QuickGOA6NNS2
Ontology : AmiGOretinol dehydrogenase activity  extracellular region  regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum  longitudinal sarcoplasmic reticulum  sarcoplasmic reticulum membrane  oxidation-reduction process  
Ontology : EGO-EBIretinol dehydrogenase activity  extracellular region  regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum  longitudinal sarcoplasmic reticulum  sarcoplasmic reticulum membrane  oxidation-reduction process  
NDEx NetworkDHRS7C
Atlas of Cancer Signalling NetworkDHRS7C
Wikipedia pathwaysDHRS7C
Orthology - Evolution
OrthoDB201140
GeneTree (enSembl)ENSG00000184544
Phylogenetic Trees/Animal Genes : TreeFamDHRS7C
HOVERGENA6NNS2
HOGENOMA6NNS2
Homologs : HomoloGeneDHRS7C
Homology/Alignments : Family Browser (UCSC)DHRS7C
Gene fusions - Rearrangements
Fusion: Tumor Portal DHRS7C
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDHRS7C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DHRS7C
dbVarDHRS7C
ClinVarDHRS7C
1000_GenomesDHRS7C 
Exome Variant ServerDHRS7C
ExAC (Exome Aggregation Consortium)ENSG00000184544
GNOMAD BrowserENSG00000184544
Genetic variants : HAPMAP201140
Genomic Variants (DGV)DHRS7C [DGVbeta]
DECIPHERDHRS7C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDHRS7C 
Mutations
ICGC Data PortalDHRS7C 
TCGA Data PortalDHRS7C 
Broad Tumor PortalDHRS7C
OASIS PortalDHRS7C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDHRS7C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDHRS7C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DHRS7C
DgiDB (Drug Gene Interaction Database)DHRS7C
DoCM (Curated mutations)DHRS7C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DHRS7C (select a term)
intoGenDHRS7C
Cancer3DDHRS7C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616161   
Orphanet
MedgenDHRS7C
Genetic Testing Registry DHRS7C
NextProtA6NNS2 [Medical]
TSGene201140
GENETestsDHRS7C
Target ValidationDHRS7C
Huge Navigator DHRS7C [HugePedia]
snp3D : Map Gene to Disease201140
BioCentury BCIQDHRS7C
ClinGenDHRS7C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD201140
Chemical/Pharm GKB GenePA142671977
Clinical trialDHRS7C
Miscellaneous
canSAR (ICR)DHRS7C (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDHRS7C
EVEXDHRS7C
GoPubMedDHRS7C
iHOPDHRS7C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:44:36 CET 2017

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