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DHX32 (DEAH-box helicase 32 (putative))

Identity

Alias_namesDDX32
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32
DEAH (Asp-Glu-Ala-His) box polypeptide 32
Alias_symbol (synonym)FLJ10889
FLJ10694
DHLP1
Other alias
HGNC (Hugo) DHX32
LocusID (NCBI) 55760
Atlas_Id 45525
Location 10q26.2  [Link to chromosome band 10q26]
Location_base_pair Starts at 125836340 and ends at 125881315 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DHX32 (10q26.2) / SEPT2 (2q37.3)PLEKHA7 (11p15.1) / DHX32 (10q26.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DHX32   16717
Cards
Entrez_Gene (NCBI)DHX32  55760  DEAH-box helicase 32 (putative)
AliasesDDX32; DHLP1
GeneCards (Weizmann)DHX32
Ensembl hg19 (Hinxton)ENSG00000089876 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000089876 [Gene_View]  chr10:125836340-125881315 [Contig_View]  DHX32 [Vega]
ICGC DataPortalENSG00000089876
TCGA cBioPortalDHX32
AceView (NCBI)DHX32
Genatlas (Paris)DHX32
WikiGenes55760
SOURCE (Princeton)DHX32
Genetics Home Reference (NIH)DHX32
Genomic and cartography
GoldenPath hg38 (UCSC)DHX32  -     chr10:125836340-125881315 -  10q26.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DHX32  -     10q26.2   [Description]    (hg19-Feb_2009)
EnsemblDHX32 - 10q26.2 [CytoView hg19]  DHX32 - 10q26.2 [CytoView hg38]
Mapping of homologs : NCBIDHX32 [Mapview hg19]  DHX32 [Mapview hg38]
OMIM607960   
Gene and transcription
Genbank (Entrez)AF427340 AF427341 AK001556 AK001751 AK024869
RefSeq transcript (Entrez)NM_018180
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DHX32
Cluster EST : UnigeneHs.370292 [ NCBI ]
CGAP (NCI)Hs.370292
Alternative Splicing GalleryENSG00000089876
Gene ExpressionDHX32 [ NCBI-GEO ]   DHX32 [ EBI - ARRAY_EXPRESS ]   DHX32 [ SEEK ]   DHX32 [ MEM ]
Gene Expression Viewer (FireBrowse)DHX32 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55760
GTEX Portal (Tissue expression)DHX32
Human Protein AtlasENSG00000089876-DHX32 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7L7V1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7L7V1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7L7V1
Splice isoforms : SwissVarQ7L7V1
Catalytic activity : Enzyme3.6.4.13 [ Enzyme-Expasy ]   3.6.4.133.6.4.13 [ IntEnz-EBI ]   3.6.4.13 [ BRENDA ]   3.6.4.13 [ KEGG ]   
PhosPhoSitePlusQ7L7V1
Domaine pattern : Prosite (Expaxy)HELICASE_ATP_BIND_1 (PS51192)   
Domains : Interpro (EBI)DUF1605    Helicase-assoc_dom    Helicase_ATP-bd    P-loop_NTPase   
Domain families : Pfam (Sanger)HA2 (PF04408)    OB_NTP_bind (PF07717)   
Domain families : Pfam (NCBI)pfam04408    pfam07717   
Domain families : Smart (EMBL)HA2 (SM00847)  
Conserved Domain (NCBI)DHX32
DMDM Disease mutations55760
Blocks (Seattle)DHX32
SuperfamilyQ7L7V1
Human Protein Atlas [tissue]ENSG00000089876-DHX32 [tissue]
Peptide AtlasQ7L7V1
HPRD06411
IPIIPI00644447   IPI00334601   IPI00641277   
Protein Interaction databases
DIP (DOE-UCLA)Q7L7V1
IntAct (EBI)Q7L7V1
FunCoupENSG00000089876
BioGRIDDHX32
STRING (EMBL)DHX32
ZODIACDHX32
Ontologies - Pathways
QuickGOQ7L7V1
Ontology : AmiGOmRNA splicing, via spliceosome  ATP-dependent RNA helicase activity  protein binding  ATP binding  spliceosomal complex  cytoplasm  mitochondrion  
Ontology : EGO-EBImRNA splicing, via spliceosome  ATP-dependent RNA helicase activity  protein binding  ATP binding  spliceosomal complex  cytoplasm  mitochondrion  
NDEx NetworkDHX32
Atlas of Cancer Signalling NetworkDHX32
Wikipedia pathwaysDHX32
Orthology - Evolution
OrthoDB55760
GeneTree (enSembl)ENSG00000089876
Phylogenetic Trees/Animal Genes : TreeFamDHX32
HOVERGENQ7L7V1
HOGENOMQ7L7V1
Homologs : HomoloGeneDHX32
Homology/Alignments : Family Browser (UCSC)DHX32
Gene fusions - Rearrangements
Tumor Fusion PortalDHX32
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDHX32 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DHX32
dbVarDHX32
ClinVarDHX32
1000_GenomesDHX32 
Exome Variant ServerDHX32
ExAC (Exome Aggregation Consortium)ENSG00000089876
GNOMAD BrowserENSG00000089876
Genetic variants : HAPMAP55760
Genomic Variants (DGV)DHX32 [DGVbeta]
DECIPHERDHX32 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDHX32 
Mutations
ICGC Data PortalDHX32 
TCGA Data PortalDHX32 
Broad Tumor PortalDHX32
OASIS PortalDHX32 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDHX32  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDHX32
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DHX32
DgiDB (Drug Gene Interaction Database)DHX32
DoCM (Curated mutations)DHX32 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DHX32 (select a term)
intoGenDHX32
Cancer3DDHX32(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607960   
Orphanet
DisGeNETDHX32
MedgenDHX32
Genetic Testing Registry DHX32
NextProtQ7L7V1 [Medical]
TSGene55760
GENETestsDHX32
Target ValidationDHX32
Huge Navigator DHX32 [HugePedia]
snp3D : Map Gene to Disease55760
BioCentury BCIQDHX32
ClinGenDHX32
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55760
Chemical/Pharm GKB GenePA27219
Clinical trialDHX32
Miscellaneous
canSAR (ICR)DHX32 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDHX32
EVEXDHX32
GoPubMedDHX32
iHOPDHX32
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:10:32 CET 2017

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