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DHX33 (DEAH (Asp-Glu-Ala-His) box polypeptide 33)

Identity

Other namesDDX33
HGNC (Hugo) DHX33
LocusID (NCBI) 56919
Location 17p13.2
Location_base_pair Starts at 5344232 and ends at 5372380 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)DHX33   16718
Entrez_Gene (NCBI)DHX33  56919  DEAH (Asp-Glu-Ala-His) box polypeptide 33
Cards
GeneCards (Weizmann)DHX33
Ensembl (Hinxton)ENSG00000005100 [Gene_View]  chr17:5344232-5372380 [Contig_View]  DHX33 [Vega]
AceView (NCBI)DHX33
Genatlas (Paris)DHX33
SOURCE (Stanford)NM_001199699 NM_020162
Genomic and cartography
GoldenPath (UCSC)DHX33  -  17p13.2   chr17:5344232-5372380 -  17p13.2   [Description]    (hg19-Feb_2009)
EnsemblDHX33 - 17p13.2 [CytoView]
Mapping of homologs : NCBIDHX33 [Mapview]
OMIM614405   
Gene and transcription
Genbank (Entrez)AK025625 AK026944 AK295074 AK295760 AK314580
RefSeq transcript (SRS)NM_001199699 NM_020162
RefSeq transcript (Entrez)NM_001199699 NM_020162
RefSeq genomic (SRS)AC_000149 NC_000017 NC_018928 NT_010718 NW_001838403 NW_004078090
RefSeq genomic (Entrez)AC_000149 NC_000017 NC_018928 NT_010718 NW_001838403 NW_004078090
Consensus coding sequences : CCDS (NCBI)DHX33
Cluster EST : UnigeneHs.250456 [ SRS ] Hs.250456 [ NCBI ]
CGAP (NCI)Hs.250456
Alternative Splicing : Fast-db (Paris)GSHG0013025
Alternative Splicing GalleryENSG00000005100
Gene ExpressionDHX33 [ NCBI-GEO ]   DHX33 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H6R0 (SRS) Q9H6R0 (Uniprot)
NextProtQ9H6R0
With graphics : InterProQ9H6R0
Splice isoforms : SwissVarQ9H6R0(Swissvar)
Domaine pattern : Prosite (SRS)DEAH_ATP_HELICASE (PS00690)    HELICASE_ATP_BIND_1 (PS51192)    HELICASE_CTER (PS51194)   
Domaine pattern : Prosite (Expaxy)DEAH_ATP_HELICASE (PS00690)    HELICASE_ATP_BIND_1 (PS51192)    HELICASE_CTER (PS51194)   
Domains : Interpro (SRS)DNA/RNA_helicase_DEAD/DEAH_N    DNA/RNA_helicase_DEAH_CS    DUF1605    Helicase-assoc_dom    Helicase_ATP-bd    Helicase_C   
Domains : Interpro (EBI)DNA/RNA_helicase_DEAD/DEAH_N    DNA/RNA_helicase_DEAH_CS    DUF1605    Helicase-assoc_dom    Helicase_ATP-bd    Helicase_C   
Related proteins : CluSTrQ9H6R0
Domain families : Pfam (SRS)DEAD (PF00270)    HA2 (PF04408)    Helicase_C (PF00271)    OB_NTP_bind (PF07717)   
Domain families : Pfam (Sanger)DEAD (PF00270)    HA2 (PF04408)    Helicase_C (PF00271)    OB_NTP_bind (PF07717)   
Domain families : Pfam (NCBI)pfam00270    pfam04408    pfam00271    pfam07717   
Domain families : Smart (EMBL)DEXDc (SM00487)  HA2 (SM00847)  HELICc (SM00490)  
DMDM56919
Blocks (Seattle)Q9H6R0
Human Protein AtlasENSG00000005100
HPRD13143
IPIIPI00655950   IPI00302860   IPI00789223   
Protein Interaction databases
DIP (DOE-UCLA)Q9H6R0
IntAct (EBI)Q9H6R0
FunCoupENSG00000005100
REACTOMEDHX33
Protein Interaction Database56919
BioGRIDDHX33
InParanoidQ9H6R0
Interologous Interaction database Q9H6R0
IntegromeDBDHX33
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)DHX33
SNP (GeneSNP Utah)DHX33
SNP : HGBaseDHX33
Genetic variants : HAPMAPDHX33
Somatic Mutations in Cancer : COSMICDHX33 
CONAN: Copy Number AnalysisDHX33 
Mutations and Diseases : HGMDDHX33
OMIM614405   
GENETests614405   
Disease Genetic AssociationDHX33
Huge Navigator DHX33 [HugePedia]  DHX33 [HugeCancerGEM]
Genomic VariantsDHX33  DHX33 [DGVbeta]
snp3D : Map Gene to Disease56919
General knowledge
Homologs : HomoloGeneDHX33
Homology/Alignments : Family Browser (UCSC)DHX33
Phylogenetic Trees/Animal Genes : TreeFamDHX33
Catalytic activity : Enzyme3.6.4.13 [ Enzyme-Expasy ]   3.6.4.13 [ Enzyme-SRS ]   3.6.4.13 [ IntEnz-EBI ]   3.6.4.13 [ BRENDA ]   3.6.4.13 [ KEGG ]   
Chemical/Protein Interactions : CTD56919
Chemical/Pharm GKB GenePA27220
Clinical trialDHX33
Cancer Resource (Charite)ENSG00000005100
Ontology : AmiGOrDNA binding  ATP binding  nucleoplasm  nucleolus  ATP-dependent helicase activity  activating transcription factor binding  positive regulation of transcription from RNA polymerase I promoter  
Ontology : EGO-EBIrDNA binding  ATP binding  nucleoplasm  nucleolus  ATP-dependent helicase activity  activating transcription factor binding  positive regulation of transcription from RNA polymerase I promoter  
Other databases
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
PubGeneDHX33
iHOPDHX33
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:42:03 CEST 2013
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