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DHX33 (DEAH (Asp-Glu-Ala-His) box polypeptide 33)

Identity

Other namesDDX33
HGNC (Hugo) DHX33
LocusID (NCBI) 56919
Location 17p13.2
Location_base_pair Starts at 5344232 and ends at 5372380 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)DHX33   16718
Cards
Entrez_Gene (NCBI)DHX33  56919  DEAH (Asp-Glu-Ala-His) box polypeptide 33
GeneCards (Weizmann)DHX33
Ensembl (Hinxton)ENSG00000005100 [Gene_View]  chr17:5344232-5372380 [Contig_View]  DHX33 [Vega]
ICGC DataPortalENSG00000005100
cBioPortalDHX33
AceView (NCBI)DHX33
Genatlas (Paris)DHX33
WikiGenes56919
SOURCE (Princeton)NM_001199699 NM_020162
Genomic and cartography
GoldenPath (UCSC)DHX33  -  17p13.2   chr17:5344232-5372380 -  17p13.2   [Description]    (hg19-Feb_2009)
EnsemblDHX33 - 17p13.2 [CytoView]
Mapping of homologs : NCBIDHX33 [Mapview]
OMIM614405   
Gene and transcription
Genbank (Entrez)AK025625 AK026944 AK295074 AK295760 AK314580
RefSeq transcript (Entrez)NM_001199699 NM_020162
RefSeq genomic (Entrez)AC_000149 NC_000017 NC_018928 NT_010718 NW_001838403 NW_004929405
Consensus coding sequences : CCDS (NCBI)DHX33
Cluster EST : UnigeneHs.250456 [ NCBI ]
CGAP (NCI)Hs.250456
Alternative Splicing : Fast-db (Paris)GSHG0013025
Alternative Splicing GalleryENSG00000005100
Gene ExpressionDHX33 [ NCBI-GEO ]     DHX33 [ SEEK ]   DHX33 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H6R0 (Uniprot)
NextProtQ9H6R0  [Medical]
With graphics : InterProQ9H6R0
Splice isoforms : SwissVarQ9H6R0 (Swissvar)
Catalytic activity : Enzyme3.6.4.13 [ Enzyme-Expasy ]   3.6.4.133.6.4.13 [ IntEnz-EBI ]   3.6.4.13 [ BRENDA ]   3.6.4.13 [ KEGG ]   
Domaine pattern : Prosite (Expaxy)DEAH_ATP_HELICASE (PS00690)    HELICASE_ATP_BIND_1 (PS51192)    HELICASE_CTER (PS51194)   
Domains : Interpro (EBI)DNA/RNA_helicase_DEAD/DEAH_N [organisation]   DNA/RNA_helicase_DEAH_CS [organisation]   DUF1605 [organisation]   Helicase-assoc_dom [organisation]   Helicase_ATP-bd [organisation]   Helicase_C [organisation]   P-loop_NTPase [organisation]  
Related proteins : CluSTrQ9H6R0
Domain families : Pfam (Sanger)DEAD (PF00270)    HA2 (PF04408)    Helicase_C (PF00271)    OB_NTP_bind (PF07717)   
Domain families : Pfam (NCBI)pfam00270    pfam04408    pfam00271    pfam07717   
Domain families : Smart (EMBL)DEXDc (SM00487)  HA2 (SM00847)  HELICc (SM00490)  
DMDM Disease mutations56919
Blocks (Seattle)Q9H6R0
Human Protein AtlasENSG00000005100 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasQ9H6R0
HPRD13143
IPIIPI00655950   IPI00302860   IPI00789223   
Protein Interaction databases
DIP (DOE-UCLA)Q9H6R0
IntAct (EBI)Q9H6R0
FunCoupENSG00000005100
BioGRIDDHX33
InParanoidQ9H6R0
Interologous Interaction database Q9H6R0
IntegromeDBDHX33
STRING (EMBL)DHX33
Ontologies - Pathways
Ontology : AmiGOrDNA binding  ATP binding  nucleoplasm  nucleolus  ATP catabolic process  ATP-dependent helicase activity  activating transcription factor binding  poly(A) RNA binding  positive regulation of transcription from RNA polymerase I promoter  
Ontology : EGO-EBIrDNA binding  ATP binding  nucleoplasm  nucleolus  ATP catabolic process  ATP-dependent helicase activity  activating transcription factor binding  poly(A) RNA binding  positive regulation of transcription from RNA polymerase I promoter  
Protein Interaction DatabaseDHX33
Wikipedia pathwaysDHX33
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)DHX33
snp3D : Map Gene to Disease56919
SNP (GeneSNP Utah)DHX33
SNP : HGBaseDHX33
Genetic variants : HAPMAPDHX33
Exome VariantDHX33
1000_GenomesDHX33 
ICGC programENSG00000005100 
Somatic Mutations in Cancer : COSMICDHX33 
CONAN: Copy Number AnalysisDHX33 
Mutations and Diseases : HGMDDHX33
Mutations and Diseases : intOGenDHX33
Genomic VariantsDHX33  DHX33 [DGVbeta]
dbVarDHX33
ClinVarDHX33
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM614405   
MedgenDHX33
GENETestsDHX33
Disease Genetic AssociationDHX33
Huge Navigator DHX33 [HugePedia]  DHX33 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneDHX33
Homology/Alignments : Family Browser (UCSC)DHX33
Phylogenetic Trees/Animal Genes : TreeFamDHX33
Chemical/Protein Interactions : CTD56919
Chemical/Pharm GKB GenePA27220
Clinical trialDHX33
Cancer Resource (Charite)ENSG00000005100
Other databases
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
CoreMineDHX33
iHOPDHX33
OncoSearchDHX33
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 26 16:44:29 CEST 2014

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