Atlas of Genetics and Cytogenetics in Oncology and Haematology


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DIAPH3-AS1 (DIAPH3 antisense RNA 1)

Identity

Alias_namesDIAPH3 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) DIAPH3-AS1
LocusID (NCBI) 100874195
Atlas_Id 62479
Location 13q21.2  [Link to chromosome band 13q21]
Location_base_pair Starts at 60012718 and ends at 60044356 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DIAPH3-AS1   39915
Cards
Entrez_Gene (NCBI)DIAPH3-AS1  100874195  DIAPH3 antisense RNA 1
Aliases
GeneCards (Weizmann)DIAPH3-AS1
Ensembl hg19 (Hinxton)ENSG00000227528 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227528 [Gene_View]  chr13:60012718-60044356 [Contig_View]  DIAPH3-AS1 [Vega]
ICGC DataPortalENSG00000227528
TCGA cBioPortalDIAPH3-AS1
AceView (NCBI)DIAPH3-AS1
Genatlas (Paris)DIAPH3-AS1
WikiGenes100874195
SOURCE (Princeton)DIAPH3-AS1
Genetics Home Reference (NIH)DIAPH3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)DIAPH3-AS1  -     chr13:60012718-60044356 +  13q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DIAPH3-AS1  -     13q21.2   [Description]    (hg19-Feb_2009)
EnsemblDIAPH3-AS1 - 13q21.2 [CytoView hg19]  DIAPH3-AS1 - 13q21.2 [CytoView hg38]
Mapping of homologs : NCBIDIAPH3-AS1 [Mapview hg19]  DIAPH3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI685327 AW468687 BC032915 BX093461 BX398653
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DIAPH3-AS1
Cluster EST : UnigeneHs.664101 [ NCBI ]
CGAP (NCI)Hs.664101
Alternative Splicing GalleryENSG00000227528
Gene ExpressionDIAPH3-AS1 [ NCBI-GEO ]   DIAPH3-AS1 [ EBI - ARRAY_EXPRESS ]   DIAPH3-AS1 [ SEEK ]   DIAPH3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)DIAPH3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874195
GTEX Portal (Tissue expression)DIAPH3-AS1
Human Protein AtlasENSG00000227528-DIAPH3-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DIAPH3-AS1
DMDM Disease mutations100874195
Blocks (Seattle)DIAPH3-AS1
Human Protein Atlas [tissue]ENSG00000227528-DIAPH3-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000227528
BioGRIDDIAPH3-AS1
STRING (EMBL)DIAPH3-AS1
ZODIACDIAPH3-AS1
Ontologies - Pathways
Huge Navigator DIAPH3-AS1 [HugePedia]
snp3D : Map Gene to Disease100874195
BioCentury BCIQDIAPH3-AS1
ClinGenDIAPH3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874195
Clinical trialDIAPH3-AS1
Miscellaneous
canSAR (ICR)DIAPH3-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene Referenkes IjtO Functions (Entrez)
CoreMineDIAPH3-AS1
EVEXDIAPH3-AS1
GoPubMedDIAPH3-AS1
iHOPDIAPH3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:44:36 CET 2017

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