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DIDO1 (death inducer-obliterator 1)

Identity

Alias_namesC20orf158
DATF1
chromosome 20 open reading frame 158
death associated transcription factor 1
Alias_symbol (synonym)DIO1
dJ885L7.8
FLJ11265
KIAA0333
DIO-1
BYE1
Other aliasDATF-1
DIDO2
DIDO3
HGNC (Hugo) DIDO1
LocusID (NCBI) 11083
Atlas_Id 43593
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 61509090 and ends at 61557903 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
DIDO1 (20q13.33) / BSPRY (9q32)DIDO1 (20q13.33) / DIDO1 (20q13.33)DIDO1 (20q13.33) / LOC100507351 (17q25.3)
DIDO1 (20q13.33) / REPS1 (6q24.1)DIDO1 (20q13.33) / SEC61A1 (3q21.3)DIDO1 (20q13.33) / TTI1 (20q11.23)
ERAL1 (17q11.2) / DIDO1 (20q13.33)SMG5 (1q22) / DIDO1 (20q13.33)SNORD104 (17q23.3) / DIDO1 (20q13.33)
ERAL1 17q11.2 / DIDO1 20q13.33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DIDO1   2680
Cards
Entrez_Gene (NCBI)DIDO1  11083  death inducer-obliterator 1
AliasesBYE1; C20orf158; DATF-1; DATF1; 
DIDO2; DIDO3; DIO-1; DIO1; dJ885L7.8
GeneCards (Weizmann)DIDO1
Ensembl hg19 (Hinxton)ENSG00000101191 [Gene_View]  chr20:61509090-61557903 [Contig_View]  DIDO1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000101191 [Gene_View]  chr20:61509090-61557903 [Contig_View]  DIDO1 [Vega]
ICGC DataPortalENSG00000101191
TCGA cBioPortalDIDO1
AceView (NCBI)DIDO1
Genatlas (Paris)DIDO1
WikiGenes11083
SOURCE (Princeton)DIDO1
Genetics Home Reference (NIH)DIDO1
Genomic and cartography
GoldenPath hg19 (UCSC)DIDO1  -     chr20:61509090-61557903 -  20q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DIDO1  -     20q13.33   [Description]    (hg38-Dec_2013)
EnsemblDIDO1 - 20q13.33 [CytoView hg19]  DIDO1 - 20q13.33 [CytoView hg38]
Mapping of homologs : NCBIDIDO1 [Mapview hg19]  DIDO1 [Mapview hg38]
OMIM604140   
Gene and transcription
Genbank (Entrez)AB002331 AF085876 AI291497 AK002127 AK127121
RefSeq transcript (Entrez)NM_001193369 NM_001193370 NM_022105 NM_033081 NM_080796 NM_080797
RefSeq genomic (Entrez)NC_000020 NC_018931 NG_029496 NT_011362 NW_004929419
Consensus coding sequences : CCDS (NCBI)DIDO1
Cluster EST : UnigeneHs.679107 [ NCBI ]
CGAP (NCI)Hs.679107
Alternative Splicing GalleryENSG00000101191
Gene ExpressionDIDO1 [ NCBI-GEO ]   DIDO1 [ EBI - ARRAY_EXPRESS ]   DIDO1 [ SEEK ]   DIDO1 [ MEM ]
Gene Expression Viewer (FireBrowse)DIDO1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11083
GTEX Portal (Tissue expression)DIDO1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BTC0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BTC0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BTC0
Splice isoforms : SwissVarQ9BTC0
PhosPhoSitePlusQ9BTC0
Domaine pattern : Prosite (Expaxy)TFIIS_CENTRAL (PS51321)    ZF_PHD_1 (PS01359)    ZF_PHD_2 (PS50016)   
Domains : Interpro (EBI)DIDO1    SPOC_C    TFIIS_cen_dom    TFS2M    Zinc_finger_PHD-type_CS    Znf_FYVE_PHD    Znf_PHD    Znf_PHD-finger    Znf_RING/FYVE/PHD   
Domain families : Pfam (Sanger)PHD (PF00628)    SPOC (PF07744)    TFIIS_M (PF07500)   
Domain families : Pfam (NCBI)pfam00628    pfam07744    pfam07500   
Domain families : Smart (EMBL)PHD (SM00249)  TFS2M (SM00510)  
Conserved Domain (NCBI)DIDO1
DMDM Disease mutations11083
Blocks (Seattle)DIDO1
PDB (SRS)2M3H    4L7X   
PDB (PDBSum)2M3H    4L7X   
PDB (IMB)2M3H    4L7X   
PDB (RSDB)2M3H    4L7X   
Structural Biology KnowledgeBase2M3H    4L7X   
SCOP (Structural Classification of Proteins)2M3H    4L7X   
CATH (Classification of proteins structures)2M3H    4L7X   
SuperfamilyQ9BTC0
Human Protein AtlasENSG00000101191
Peptide AtlasQ9BTC0
HPRD10363
IPIIPI00249982   IPI00249984   IPI00183350   IPI00619921   IPI00984350   
Protein Interaction databases
DIP (DOE-UCLA)Q9BTC0
IntAct (EBI)Q9BTC0
FunCoupENSG00000101191
BioGRIDDIDO1
STRING (EMBL)DIDO1
ZODIACDIDO1
Ontologies - Pathways
QuickGOQ9BTC0
Ontology : AmiGOnucleus  cytoplasm  spindle  transcription, DNA-templated  zinc ion binding  poly(A) RNA binding  apoptotic signaling pathway  
Ontology : EGO-EBInucleus  cytoplasm  spindle  transcription, DNA-templated  zinc ion binding  poly(A) RNA binding  apoptotic signaling pathway  
NDEx NetworkDIDO1
Atlas of Cancer Signalling NetworkDIDO1
Wikipedia pathwaysDIDO1
Orthology - Evolution
OrthoDB11083
GeneTree (enSembl)ENSG00000101191
Phylogenetic Trees/Animal Genes : TreeFamDIDO1
HOVERGENQ9BTC0
HOGENOMQ9BTC0
Homologs : HomoloGeneDIDO1
Homology/Alignments : Family Browser (UCSC)DIDO1
Gene fusions - Rearrangements
Fusion : MitelmanDIDO1/REPS1 [20q13.33/6q24.1]  
Fusion : MitelmanERAL1/DIDO1 [17q11.2/20q13.33]  [t(17;20)(q11;q13)]  
Fusion: TCGAERAL1 17q11.2 DIDO1 20q13.33 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDIDO1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DIDO1
dbVarDIDO1
ClinVarDIDO1
1000_GenomesDIDO1 
Exome Variant ServerDIDO1
ExAC (Exome Aggregation Consortium)DIDO1 (select the gene name)
Genetic variants : HAPMAP11083
Genomic Variants (DGV)DIDO1 [DGVbeta]
DECIPHER (Syndromes)20:61509090-61557903  ENSG00000101191
CONAN: Copy Number AnalysisDIDO1 
Mutations
ICGC Data PortalDIDO1 
TCGA Data PortalDIDO1 
Broad Tumor PortalDIDO1
OASIS PortalDIDO1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDIDO1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDIDO1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DIDO1
DgiDB (Drug Gene Interaction Database)DIDO1
DoCM (Curated mutations)DIDO1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DIDO1 (select a term)
intoGenDIDO1
Cancer3DDIDO1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604140   
Orphanet
MedgenDIDO1
Genetic Testing Registry DIDO1
NextProtQ9BTC0 [Medical]
TSGene11083
GENETestsDIDO1
Huge Navigator DIDO1 [HugePedia]
snp3D : Map Gene to Disease11083
BioCentury BCIQDIDO1
ClinGenDIDO1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD11083
Chemical/Pharm GKB GenePA27147
Clinical trialDIDO1
Miscellaneous
canSAR (ICR)DIDO1 (select the gene name)
Probes
Litterature
PubMed45 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDIDO1
EVEXDIDO1
GoPubMedDIDO1
iHOPDIDO1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 14:58:53 CEST 2017

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