Atlas of Genetics and Cytogenetics in Oncology and Haematology


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DIO1 (iodothyronine deiodinase 1)

Identity

Alias (NCBI)5DI
TXDI1
HGNC (Hugo) DIO1
HGNC Alias namethyroxine 5'-deiodinase
 type I iodothyronine deiodinase
HGNC Previous nameTXDI1
HGNC Previous namedeiodinase, iodothyronine type I
LocusID (NCBI) 1733
Atlas_Id 40308
Location 1p32.3  [Link to chromosome band 1p32]
Location_base_pair Starts at 53894187 and ends at 53911086 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LOC100507412 (-) / DIO1 (1p32.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)DIO1   2883
Cards
Entrez_Gene (NCBI)DIO1    iodothyronine deiodinase 1
Aliases5DI; TXDI1
GeneCards (Weizmann)DIO1
Ensembl hg19 (Hinxton)ENSG00000211452 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000211452 [Gene_View]  ENSG00000211452 [Sequence]  chr1:53894187-53911086 [Contig_View]  DIO1 [Vega]
ICGC DataPortalENSG00000211452
TCGA cBioPortalDIO1
AceView (NCBI)DIO1
Genatlas (Paris)DIO1
SOURCE (Princeton)DIO1
Genetics Home Reference (NIH)DIO1
Genomic and cartography
GoldenPath hg38 (UCSC)DIO1  -     chr1:53894187-53911086 +  1p32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DIO1  -     1p32.3   [Description]    (hg19-Feb_2009)
GoldenPathDIO1 - 1p32.3 [CytoView hg19]  DIO1 - 1p32.3 [CytoView hg38]
ImmunoBaseENSG00000211452
genome Data Viewer NCBIDIO1 [Mapview hg19]  
OMIM147892   
Gene and transcription
Genbank (Entrez)AK290780 AW294928 AY560374 AY560375 AY560376
RefSeq transcript (Entrez)NM_000792 NM_001039715 NM_001039716 NM_001324316 NM_213593
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DIO1
Alternative Splicing GalleryENSG00000211452
Gene ExpressionDIO1 [ NCBI-GEO ]   DIO1 [ EBI - ARRAY_EXPRESS ]   DIO1 [ SEEK ]   DIO1 [ MEM ]
Gene Expression Viewer (FireBrowse)DIO1 [ Firebrowse - Broad ]
GenevisibleExpression of DIO1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1733
GTEX Portal (Tissue expression)DIO1
Human Protein AtlasENSG00000211452-DIO1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DIO1
Blocks (Seattle)DIO1
Human Protein Atlas [tissue]ENSG00000211452-DIO1 [tissue]
HPRD01002
IPIIPI00028634   IPI00412686   IPI00451421   IPI00514323   IPI00552076   IPI00451420   IPI00515078   IPI00552688   IPI00451418   IPI00977200   IPI01022979   IPI00979297   IPI00981230   IPI00978603   
Protein Interaction databases
BioGRIDDIO1
STRING (EMBL)DIO1
ZODIACDIO1
Ontologies - Pathways
Litterature
PubMed67 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXDIO1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 25 19:18:30 CET 2021

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