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DIP2A (disco interacting protein 2 homolog A)

Identity

Alias_namesC21orf106
chromosome 21 open reading frame 106
DIP2 disco-interacting protein 2 homolog A (Drosophila)
Alias_symbol (synonym)Dip2
KIAA0184
Other aliasDIP2
HGNC (Hugo) DIP2A
LocusID (NCBI) 23181
Atlas_Id 62486
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 46458949 and ends at 46547207 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ARHGEF9 (Xq11.1) / DIP2A (21q22.3)DIP2A (21q22.3) / KCNE1 (21q22.12)DIP2A (21q22.3) / PRH1 (12p13.2)
DIP2A (21q22.3) / PRR4 (12p13.2)DIP2A (21q22.3) / THOC2 (Xq25)PRMT2 (21q22.3) / DIP2A (21q22.3)
DIP2A PRR4DIP2A PRH1DIP2A THOC2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DIP2A   17217
Cards
Entrez_Gene (NCBI)DIP2A  23181  disco interacting protein 2 homolog A
AliasesC21orf106; DIP2
GeneCards (Weizmann)DIP2A
Ensembl hg19 (Hinxton)ENSG00000160305 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160305 [Gene_View]  chr21:46458949-46547207 [Contig_View]  DIP2A [Vega]
ICGC DataPortalENSG00000160305
TCGA cBioPortalDIP2A
AceView (NCBI)DIP2A
Genatlas (Paris)DIP2A
WikiGenes23181
SOURCE (Princeton)DIP2A
Genetics Home Reference (NIH)DIP2A
Genomic and cartography
GoldenPath hg38 (UCSC)DIP2A  -     chr21:46458949-46547207 +  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DIP2A  -     21q22.3   [Description]    (hg19-Feb_2009)
EnsemblDIP2A - 21q22.3 [CytoView hg19]  DIP2A - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBIDIP2A [Mapview hg19]  DIP2A [Mapview hg38]
OMIM607711   
Gene and transcription
Genbank (Entrez)AB273729 AF432263 AF490768 AK054807 AK056738
RefSeq transcript (Entrez)NM_001146114 NM_001146115 NM_001146116 NM_015151 NM_206889 NM_206890 NM_206891
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DIP2A
Cluster EST : UnigeneHs.189585 [ NCBI ]
CGAP (NCI)Hs.189585
Alternative Splicing GalleryENSG00000160305
Gene ExpressionDIP2A [ NCBI-GEO ]   DIP2A [ EBI - ARRAY_EXPRESS ]   DIP2A [ SEEK ]   DIP2A [ MEM ]
Gene Expression Viewer (FireBrowse)DIP2A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23181
GTEX Portal (Tissue expression)DIP2A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14689   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14689  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14689
Splice isoforms : SwissVarQ14689
PhosPhoSitePlusQ14689
Domains : Interpro (EBI)AMP-dep_Synth/Lig    DMAP1-bd   
Domain families : Pfam (Sanger)AMP-binding (PF00501)    DMAP_binding (PF06464)   
Domain families : Pfam (NCBI)pfam00501    pfam06464   
Domain families : Smart (EMBL)DMAP_binding (SM01137)  
Conserved Domain (NCBI)DIP2A
DMDM Disease mutations23181
Blocks (Seattle)DIP2A
SuperfamilyQ14689
Human Protein AtlasENSG00000160305
Peptide AtlasQ14689
HPRD07611
IPIIPI00941011   IPI00335360   IPI00017734   IPI00335362   IPI00654865   IPI00925788   IPI00410130   IPI01009642   
Protein Interaction databases
DIP (DOE-UCLA)Q14689
IntAct (EBI)Q14689
FunCoupENSG00000160305
BioGRIDDIP2A
STRING (EMBL)DIP2A
ZODIACDIP2A
Ontologies - Pathways
QuickGOQ14689
Ontology : AmiGOcatalytic activity  protein binding  nucleus  multicellular organism development  metabolic process  cell surface  negative regulation of gene expression  regulation of apoptotic process  
Ontology : EGO-EBIcatalytic activity  protein binding  nucleus  multicellular organism development  metabolic process  cell surface  negative regulation of gene expression  regulation of apoptotic process  
NDEx NetworkDIP2A
Atlas of Cancer Signalling NetworkDIP2A
Wikipedia pathwaysDIP2A
Orthology - Evolution
OrthoDB23181
GeneTree (enSembl)ENSG00000160305
Phylogenetic Trees/Animal Genes : TreeFamDIP2A
HOVERGENQ14689
HOGENOMQ14689
Homologs : HomoloGeneDIP2A
Homology/Alignments : Family Browser (UCSC)DIP2A
Gene fusions - Rearrangements
Fusion: TCGADIP2A PRR4
Fusion: TCGADIP2A PRH1
Fusion: TCGADIP2A THOC2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDIP2A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DIP2A
dbVarDIP2A
ClinVarDIP2A
1000_GenomesDIP2A 
Exome Variant ServerDIP2A
ExAC (Exome Aggregation Consortium)DIP2A (select the gene name)
Genetic variants : HAPMAP23181
Genomic Variants (DGV)DIP2A [DGVbeta]
DECIPHERDIP2A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDIP2A 
Mutations
ICGC Data PortalDIP2A 
TCGA Data PortalDIP2A 
Broad Tumor PortalDIP2A
OASIS PortalDIP2A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDIP2A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDIP2A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DIP2A
DgiDB (Drug Gene Interaction Database)DIP2A
DoCM (Curated mutations)DIP2A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DIP2A (select a term)
intoGenDIP2A
Cancer3DDIP2A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607711   
Orphanet
MedgenDIP2A
Genetic Testing Registry DIP2A
NextProtQ14689 [Medical]
TSGene23181
GENETestsDIP2A
Target ValidationDIP2A
Huge Navigator DIP2A [HugePedia]
snp3D : Map Gene to Disease23181
BioCentury BCIQDIP2A
ClinGenDIP2A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23181
Chemical/Pharm GKB GenePA134888233
Clinical trialDIP2A
Miscellaneous
canSAR (ICR)DIP2A (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDIP2A
EVEXDIP2A
GoPubMedDIP2A
iHOPDIP2A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:06:17 CEST 2017

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