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DIP2B (disco interacting protein 2 homolog B)

Identity

Alias_namesDIP2 disco-interacting protein 2 homolog B (Drosophila)
Alias_symbol (synonym)KIAA1463
FLJ34278
Other alias-
HGNC (Hugo) DIP2B
LocusID (NCBI) 57609
Atlas_Id 54254
Location 12q13.12  [Link to chromosome band 12q13]
Location_base_pair Starts at 50504985 and ends at 50748667 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DIP2B (12q13.12) / DIP2B (12q13.12)DIP2B (12q13.12) / ERBB2 (17q12)DIP2B (12q13.12) / LARP4 (12q13.12)
DIP2B (12q13.12) / LRRC59 (17q21.33)DIP2B (12q13.12) / RTTN (18q22.2)DIP2B (12q13.12) / SPATS2 (12q13.12)
DIP2B (12q13.12) / TAF8 (6p21.1)DIP2B (12q13.12) / TBC1D15 (12q21.1)DIP2B (12q13.12) / TMBIM6 (12q13.12)
LARP4 (12q13.12) / DIP2B (12q13.12)TFEB (6p21.1) / DIP2B (12q13.12)DIP2B 12q13.12 / LARP4 12q13.12
DIP2B 12q13.12 / RTTN 18q22.2DIP2B 12q13.12 / SPATS2 12q13.12DIP2B 12q13.12 / TAF8 6p21.1
DIP2B 12q13.12 / TBC1D15 12q21.1DIP2B 12q13.12 / TMBIM6 12q13.12TFEB 6p21.1 / DIP2B 12q13.12

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DIP2B   29284
Cards
Entrez_Gene (NCBI)DIP2B  57609  disco interacting protein 2 homolog B
Aliases
GeneCards (Weizmann)DIP2B
Ensembl hg19 (Hinxton)ENSG00000066084 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000066084 [Gene_View]  chr12:50504985-50748667 [Contig_View]  DIP2B [Vega]
ICGC DataPortalENSG00000066084
TCGA cBioPortalDIP2B
AceView (NCBI)DIP2B
Genatlas (Paris)DIP2B
WikiGenes57609
SOURCE (Princeton)DIP2B
Genetics Home Reference (NIH)DIP2B
Genomic and cartography
GoldenPath hg38 (UCSC)DIP2B  -     chr12:50504985-50748667 +  12q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DIP2B  -     12q13.12   [Description]    (hg19-Feb_2009)
EnsemblDIP2B - 12q13.12 [CytoView hg19]  DIP2B - 12q13.12 [CytoView hg38]
Mapping of homologs : NCBIDIP2B [Mapview hg19]  DIP2B [Mapview hg38]
OMIM136630   611379   
Gene and transcription
Genbank (Entrez)AB040896 AK091597 AK094890 AK097369 AK126758
RefSeq transcript (Entrez)NM_020849 NM_173602
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DIP2B
Cluster EST : UnigeneHs.505516 [ NCBI ]
CGAP (NCI)Hs.505516
Alternative Splicing GalleryENSG00000066084
Gene ExpressionDIP2B [ NCBI-GEO ]   DIP2B [ EBI - ARRAY_EXPRESS ]   DIP2B [ SEEK ]   DIP2B [ MEM ]
Gene Expression Viewer (FireBrowse)DIP2B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57609
GTEX Portal (Tissue expression)DIP2B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P265   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P265  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P265
Splice isoforms : SwissVarQ9P265
PhosPhoSitePlusQ9P265
Domains : Interpro (EBI)AMP-dep_Synth/Lig    DMAP1-bd   
Domain families : Pfam (Sanger)AMP-binding (PF00501)    DMAP_binding (PF06464)   
Domain families : Pfam (NCBI)pfam00501    pfam06464   
Domain families : Smart (EMBL)DMAP_binding (SM01137)  
Conserved Domain (NCBI)DIP2B
DMDM Disease mutations57609
Blocks (Seattle)DIP2B
SuperfamilyQ9P265
Human Protein AtlasENSG00000066084
Peptide AtlasQ9P265
HPRD08751
IPIIPI00465045   IPI00643040   IPI01021191   
Protein Interaction databases
DIP (DOE-UCLA)Q9P265
IntAct (EBI)Q9P265
FunCoupENSG00000066084
BioGRIDDIP2B
STRING (EMBL)DIP2B
ZODIACDIP2B
Ontologies - Pathways
QuickGOQ9P265
Ontology : AmiGOmolecular_function  catalytic activity  nucleus  cytoplasm  biological_process  metabolic process  membrane  extracellular exosome  
Ontology : EGO-EBImolecular_function  catalytic activity  nucleus  cytoplasm  biological_process  metabolic process  membrane  extracellular exosome  
NDEx NetworkDIP2B
Atlas of Cancer Signalling NetworkDIP2B
Wikipedia pathwaysDIP2B
Orthology - Evolution
OrthoDB57609
GeneTree (enSembl)ENSG00000066084
Phylogenetic Trees/Animal Genes : TreeFamDIP2B
HOVERGENQ9P265
HOGENOMQ9P265
Homologs : HomoloGeneDIP2B
Homology/Alignments : Family Browser (UCSC)DIP2B
Gene fusions - Rearrangements
Fusion : MitelmanDIP2B/ERBB2 [12q13.12/17q12]  
Fusion : MitelmanDIP2B/LARP4 [12q13.12/12q13.12]  [t(12;12)(q13;q13)]  
Fusion : MitelmanDIP2B/RTTN [12q13.12/18q22.2]  [t(12;18)(q13;q22)]  
Fusion : MitelmanDIP2B/SPATS2 [12q13.12/12q13.12]  [t(12;12)(q13;q13)]  
Fusion : MitelmanDIP2B/TAF8 [12q13.12/6p21.1]  [t(6;12)(p21;q13)]  
Fusion : MitelmanDIP2B/TBC1D15 [12q13.12/12q21.1]  [t(12;12)(q13;q21)]  
Fusion : MitelmanDIP2B/TMBIM6 [12q13.12/12q13.12]  [t(12;12)(q13;q13)]  
Fusion : MitelmanTFEB/DIP2B [6p21.1/12q13.12]  [t(6;12)(p21;q13)]  
Fusion: TCGADIP2B 12q13.12 LARP4 12q13.12 LUSC
Fusion: TCGADIP2B 12q13.12 RTTN 18q22.2 LGG
Fusion: TCGADIP2B 12q13.12 SPATS2 12q13.12 BLCA
Fusion: TCGADIP2B 12q13.12 TAF8 6p21.1 GBM
Fusion: TCGADIP2B 12q13.12 TBC1D15 12q21.1 SKCM
Fusion: TCGADIP2B 12q13.12 TMBIM6 12q13.12 GBM
Fusion: TCGATFEB 6p21.1 DIP2B 12q13.12 GBM
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDIP2B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DIP2B
dbVarDIP2B
ClinVarDIP2B
1000_GenomesDIP2B 
Exome Variant ServerDIP2B
ExAC (Exome Aggregation Consortium)DIP2B (select the gene name)
Genetic variants : HAPMAP57609
Genomic Variants (DGV)DIP2B [DGVbeta]
DECIPHERDIP2B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDIP2B 
Mutations
ICGC Data PortalDIP2B 
TCGA Data PortalDIP2B 
Broad Tumor PortalDIP2B
OASIS PortalDIP2B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDIP2B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDIP2B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DIP2B
DgiDB (Drug Gene Interaction Database)DIP2B
DoCM (Curated mutations)DIP2B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DIP2B (select a term)
intoGenDIP2B
Cancer3DDIP2B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM136630    611379   
Orphanet
MedgenDIP2B
Genetic Testing Registry DIP2B
NextProtQ9P265 [Medical]
TSGene57609
GENETestsDIP2B
Target ValidationDIP2B
Huge Navigator DIP2B [HugePedia]
snp3D : Map Gene to Disease57609
BioCentury BCIQDIP2B
ClinGenDIP2B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57609
Chemical/Pharm GKB GenePA143485449
Clinical trialDIP2B
Miscellaneous
canSAR (ICR)DIP2B (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDIP2B
EVEXDIP2B
GoPubMedDIP2B
iHOPDIP2B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:31:12 CEST 2017

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