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DIP2C (disco interacting protein 2 homolog C)

Identity

Alias_namesKIAA0934
KIAA0934
DIP2 disco-interacting protein 2 homolog C (Drosophila)
Other alias
HGNC (Hugo) DIP2C
LocusID (NCBI) 22982
Atlas_Id 62488
Location 10p15.3  [Link to chromosome band 10p15]
Location_base_pair Starts at 274190 and ends at 689668 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CDH17 (8q22.1) / DIP2C (10p15.3)DHX58 (17q21.2) / DIP2C (10p15.3)DIP2C (10p15.3) / CD47 (3q13.12)
DIP2C (10p15.3) / PATJ (1p31.3)DIP2C (10p15.3) / SFMBT2 (10p14)DIP2C (10p15.3) / TECTA (11q23.3)
DIP2C (10p15.3) / YY1 (14q32.2)DIP2C (10p15.3) / ZMYND11 (10p15.3)FKBP4 (12p13.33) / DIP2C (10p15.3)
PTGDS (9q34.3) / DIP2C (10p15.3)PTTG1IP (21q22.3) / DIP2C (10p15.3)TIE1 (1p34.2) / DIP2C (10p15.3)
DIP2C YY1DIP2C TECTADIP2C ZMYND11

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DIP2C   29150
Cards
Entrez_Gene (NCBI)DIP2C  22982  disco interacting protein 2 homolog C
AliasesKIAA0934
GeneCards (Weizmann)DIP2C
Ensembl hg19 (Hinxton)ENSG00000151240 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000151240 [Gene_View]  chr10:274190-689668 [Contig_View]  DIP2C [Vega]
ICGC DataPortalENSG00000151240
TCGA cBioPortalDIP2C
AceView (NCBI)DIP2C
Genatlas (Paris)DIP2C
WikiGenes22982
SOURCE (Princeton)DIP2C
Genetics Home Reference (NIH)DIP2C
Genomic and cartography
GoldenPath hg38 (UCSC)DIP2C  -     chr10:274190-689668 -  10p15.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DIP2C  -     10p15.3   [Description]    (hg19-Feb_2009)
EnsemblDIP2C - 10p15.3 [CytoView hg19]  DIP2C - 10p15.3 [CytoView hg38]
Mapping of homologs : NCBIDIP2C [Mapview hg19]  DIP2C [Mapview hg38]
OMIM611380   
Gene and transcription
Genbank (Entrez)AB023151 AI913413 AK126063 AK298353 AK309715
RefSeq transcript (Entrez)NM_014974
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DIP2C
Cluster EST : UnigeneHs.432397 [ NCBI ]
CGAP (NCI)Hs.432397
Alternative Splicing GalleryENSG00000151240
Gene ExpressionDIP2C [ NCBI-GEO ]   DIP2C [ EBI - ARRAY_EXPRESS ]   DIP2C [ SEEK ]   DIP2C [ MEM ]
Gene Expression Viewer (FireBrowse)DIP2C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22982
GTEX Portal (Tissue expression)DIP2C
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y2E4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y2E4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y2E4
Splice isoforms : SwissVarQ9Y2E4
PhosPhoSitePlusQ9Y2E4
Domains : Interpro (EBI)AMP-dep_Synth/Lig    DMAP1-bd   
Domain families : Pfam (Sanger)AMP-binding (PF00501)    DMAP_binding (PF06464)   
Domain families : Pfam (NCBI)pfam00501    pfam06464   
Domain families : Smart (EMBL)DMAP_binding (SM01137)  
Conserved Domain (NCBI)DIP2C
DMDM Disease mutations22982
Blocks (Seattle)DIP2C
SuperfamilyQ9Y2E4
Human Protein AtlasENSG00000151240
Peptide AtlasQ9Y2E4
HPRD17200
IPIIPI00032087   IPI00910190   IPI00643330   IPI00552729   IPI01014516   IPI00514947   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y2E4
IntAct (EBI)Q9Y2E4
FunCoupENSG00000151240
BioGRIDDIP2C
STRING (EMBL)DIP2C
ZODIACDIP2C
Ontologies - Pathways
QuickGOQ9Y2E4
Ontology : AmiGOmolecular_function  catalytic activity  cellular_component  biological_process  metabolic process  
Ontology : EGO-EBImolecular_function  catalytic activity  cellular_component  biological_process  metabolic process  
NDEx NetworkDIP2C
Atlas of Cancer Signalling NetworkDIP2C
Wikipedia pathwaysDIP2C
Orthology - Evolution
OrthoDB22982
GeneTree (enSembl)ENSG00000151240
Phylogenetic Trees/Animal Genes : TreeFamDIP2C
HOVERGENQ9Y2E4
HOGENOMQ9Y2E4
Homologs : HomoloGeneDIP2C
Homology/Alignments : Family Browser (UCSC)DIP2C
Gene fusions - Rearrangements
Fusion: TCGADIP2C YY1
Fusion: TCGADIP2C TECTA
Fusion: TCGADIP2C ZMYND11
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDIP2C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DIP2C
dbVarDIP2C
ClinVarDIP2C
1000_GenomesDIP2C 
Exome Variant ServerDIP2C
ExAC (Exome Aggregation Consortium)DIP2C (select the gene name)
Genetic variants : HAPMAP22982
Genomic Variants (DGV)DIP2C [DGVbeta]
DECIPHERDIP2C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDIP2C 
Mutations
ICGC Data PortalDIP2C 
TCGA Data PortalDIP2C 
Broad Tumor PortalDIP2C
OASIS PortalDIP2C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDIP2C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDIP2C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DIP2C
DgiDB (Drug Gene Interaction Database)DIP2C
DoCM (Curated mutations)DIP2C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DIP2C (select a term)
intoGenDIP2C
Cancer3DDIP2C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611380   
Orphanet
MedgenDIP2C
Genetic Testing Registry DIP2C
NextProtQ9Y2E4 [Medical]
TSGene22982
GENETestsDIP2C
Target ValidationDIP2C
Huge Navigator DIP2C [HugePedia]
snp3D : Map Gene to Disease22982
BioCentury BCIQDIP2C
ClinGenDIP2C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD22982
Chemical/Pharm GKB GenePA134961070
Clinical trialDIP2C
Miscellaneous
canSAR (ICR)DIP2C (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDIP2C
EVEXDIP2C
GoPubMedDIP2C
iHOPDIP2C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:45:55 CEST 2017

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