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DISP3 (dispatched RND transporter family member 3)

Identity

Alias_namesPTCHD2
patched domain containing 2
Alias_symbol (synonym)KIAA1337
Other alias
HGNC (Hugo) DISP3
LocusID (NCBI) 57540
Atlas_Id 55707
Location 1p36.22  [Link to chromosome band 1p36]
Location_base_pair Starts at 11479238 and ends at 11537583 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DISP3   29251
Cards
Entrez_Gene (NCBI)DISP3  57540  dispatched RND transporter family member 3
AliasesPTCHD2
GeneCards (Weizmann)DISP3
Ensembl hg19 (Hinxton)ENSG00000204624 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204624 [Gene_View]  chr1:11479238-11537583 [Contig_View]  DISP3 [Vega]
ICGC DataPortalENSG00000204624
TCGA cBioPortalDISP3
AceView (NCBI)DISP3
Genatlas (Paris)DISP3
WikiGenes57540
SOURCE (Princeton)DISP3
Genetics Home Reference (NIH)DISP3
Genomic and cartography
GoldenPath hg38 (UCSC)DISP3  -     chr1:11479238-11537583 +  1p36.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DISP3  -     1p36.22   [Description]    (hg19-Feb_2009)
EnsemblDISP3 - 1p36.22 [CytoView hg19]  DISP3 - 1p36.22 [CytoView hg38]
Mapping of homologs : NCBIDISP3 [Mapview hg19]  DISP3 [Mapview hg38]
OMIM611251   
Gene and transcription
Genbank (Entrez)AB037758 AB593117 AK311332 AL117235 AL117236
RefSeq transcript (Entrez)NM_020780
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DISP3
Cluster EST : UnigeneHs.202355 [ NCBI ]
CGAP (NCI)Hs.202355
Alternative Splicing GalleryENSG00000204624
Gene ExpressionDISP3 [ NCBI-GEO ]   DISP3 [ EBI - ARRAY_EXPRESS ]   DISP3 [ SEEK ]   DISP3 [ MEM ]
Gene Expression Viewer (FireBrowse)DISP3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57540
GTEX Portal (Tissue expression)DISP3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P2K9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P2K9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P2K9
Splice isoforms : SwissVarQ9P2K9
PhosPhoSitePlusQ9P2K9
Domaine pattern : Prosite (Expaxy)SSD (PS50156)   
Domains : Interpro (EBI)Ptc/Disp    SSD   
Domain families : Pfam (Sanger)Patched (PF02460)   
Domain families : Pfam (NCBI)pfam02460   
Conserved Domain (NCBI)DISP3
DMDM Disease mutations57540
Blocks (Seattle)DISP3
SuperfamilyQ9P2K9
Human Protein AtlasENSG00000204624
Peptide AtlasQ9P2K9
IPIIPI00853396   IPI00002283   IPI00155900   
Protein Interaction databases
DIP (DOE-UCLA)Q9P2K9
IntAct (EBI)Q9P2K9
FunCoupENSG00000204624
BioGRIDDISP3
STRING (EMBL)DISP3
ZODIACDISP3
Ontologies - Pathways
QuickGOQ9P2K9
Ontology : AmiGOmolecular_function  cytoplasm  endoplasmic reticulum  endoplasmic reticulum membrane  smoothened signaling pathway  cholesterol metabolic process  integral component of membrane  cytoplasmic vesicle membrane  nuclear membrane  regulation of lipid transport  cholesterol homeostasis  negative regulation of neuron differentiation  positive regulation of lipid metabolic process  positive regulation of neural precursor cell proliferation  
Ontology : EGO-EBImolecular_function  cytoplasm  endoplasmic reticulum  endoplasmic reticulum membrane  smoothened signaling pathway  cholesterol metabolic process  integral component of membrane  cytoplasmic vesicle membrane  nuclear membrane  regulation of lipid transport  cholesterol homeostasis  negative regulation of neuron differentiation  positive regulation of lipid metabolic process  positive regulation of neural precursor cell proliferation  
NDEx NetworkDISP3
Atlas of Cancer Signalling NetworkDISP3
Wikipedia pathwaysDISP3
Orthology - Evolution
OrthoDB57540
GeneTree (enSembl)ENSG00000204624
Phylogenetic Trees/Animal Genes : TreeFamDISP3
HOVERGENQ9P2K9
HOGENOMQ9P2K9
Homologs : HomoloGeneDISP3
Homology/Alignments : Family Browser (UCSC)DISP3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDISP3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DISP3
dbVarDISP3
ClinVarDISP3
1000_GenomesDISP3 
Exome Variant ServerDISP3
ExAC (Exome Aggregation Consortium)DISP3 (select the gene name)
Genetic variants : HAPMAP57540
Genomic Variants (DGV)DISP3 [DGVbeta]
DECIPHERDISP3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDISP3 
Mutations
ICGC Data PortalDISP3 
TCGA Data PortalDISP3 
Broad Tumor PortalDISP3
OASIS PortalDISP3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDDISP3
BioMutasearch DISP3
DgiDB (Drug Gene Interaction Database)DISP3
DoCM (Curated mutations)DISP3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DISP3 (select a term)
intoGenDISP3
Cancer3DDISP3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611251   
Orphanet
MedgenDISP3
Genetic Testing Registry DISP3
NextProtQ9P2K9 [Medical]
TSGene57540
GENETestsDISP3
Target ValidationDISP3
Huge Navigator DISP3 [HugePedia]
snp3D : Map Gene to Disease57540
BioCentury BCIQDISP3
ClinGenDISP3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57540
Chemical/Pharm GKB GenePA142671116
Clinical trialDISP3
Miscellaneous
canSAR (ICR)DISP3 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDISP3
EVEXDISP3
GoPubMedDISP3
iHOPDISP3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:31:14 CEST 2017

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