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DKFZP434L187 (uncharacterized LOC26082)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 26082
Atlas_Id 62499
Location 15q13.2  [Link to chromosome band 15q13]
Location_base_pair Starts at 30488239 and ends at 30506743 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)DKFZP434L187  26082  uncharacterized LOC26082
Aliases
GeneCards (Weizmann)DKFZP434L187
Ensembl hg19 (Hinxton)ENSG00000225930 [Gene_View]  chr15:30488239-30506743 [Contig_View]  DKFZP434L187 [Vega]
Ensembl hg38 (Hinxton)ENSG00000225930 [Gene_View]  chr15:30488239-30506743 [Contig_View]  DKFZP434L187 [Vega]
ICGC DataPortalENSG00000225930
TCGA cBioPortalDKFZP434L187
AceView (NCBI)DKFZP434L187
Genatlas (Paris)DKFZP434L187
WikiGenes26082
SOURCE (Princeton)DKFZP434L187
Genetics Home Reference (NIH)DKFZP434L187
Genomic and cartography
GoldenPath hg19 (UCSC)DKFZP434L187  -     chr15:30488239-30506743 +  15q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DKFZP434L187  -     15q13.2   [Description]    (hg38-Dec_2013)
EnsemblDKFZP434L187 - 15q13.2 [CytoView hg19]  DKFZP434L187 - 15q13.2 [CytoView hg38]
Mapping of homologs : NCBIDKFZP434L187 [Mapview hg19]  DKFZP434L187 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL117445 BC033224 BC130408 BC130410 HG506822
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_010194 NT_187660 NW_004929398 NW_011332701
Consensus coding sequences : CCDS (NCBI)DKFZP434L187
Cluster EST : UnigeneHs.652128 [ NCBI ]
CGAP (NCI)Hs.652128
Alternative Splicing GalleryENSG00000225930
Gene ExpressionDKFZP434L187 [ NCBI-GEO ]   DKFZP434L187 [ EBI - ARRAY_EXPRESS ]   DKFZP434L187 [ SEEK ]   DKFZP434L187 [ MEM ]
Gene Expression Viewer (FireBrowse)DKFZP434L187 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26082
GTEX Portal (Tissue expression)DKFZP434L187
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UFV3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UFV3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UFV3
Splice isoforms : SwissVarQ9UFV3
PhosPhoSitePlusQ9UFV3
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DKFZP434L187
DMDM Disease mutations26082
Blocks (Seattle)DKFZP434L187
SuperfamilyQ9UFV3
Human Protein AtlasENSG00000225930
Peptide AtlasQ9UFV3
IPIIPI00401852   
Protein Interaction databases
DIP (DOE-UCLA)Q9UFV3
IntAct (EBI)Q9UFV3
FunCoupENSG00000225930
BioGRIDDKFZP434L187
STRING (EMBL)DKFZP434L187
ZODIACDKFZP434L187
Ontologies - Pathways
QuickGOQ9UFV3
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkDKFZP434L187
Atlas of Cancer Signalling NetworkDKFZP434L187
Wikipedia pathwaysDKFZP434L187
Orthology - Evolution
OrthoDB26082
GeneTree (enSembl)ENSG00000225930
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENQ9UFV3
HOGENOMQ9UFV3
Homologs : HomoloGeneDKFZP434L187
Homology/Alignments : Family Browser (UCSC)DKFZP434L187
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDKFZP434L187 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DKFZP434L187
dbVarDKFZP434L187
ClinVarDKFZP434L187
1000_GenomesDKFZP434L187 
Exome Variant ServerDKFZP434L187
ExAC (Exome Aggregation Consortium)DKFZP434L187 (select the gene name)
Genetic variants : HAPMAP26082
Genomic Variants (DGV)DKFZP434L187 [DGVbeta]
DECIPHER (Syndromes)15:30488239-30506743  ENSG00000225930
CONAN: Copy Number AnalysisDKFZP434L187 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch DKFZP434L187
DgiDB (Drug Gene Interaction Database)DKFZP434L187
DoCM (Curated mutations)DKFZP434L187 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DKFZP434L187 (select a term)
intoGenDKFZP434L187
Cancer3DDKFZP434L187(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDKFZP434L187
Genetic Testing Registry DKFZP434L187
NextProtQ9UFV3 [Medical]
TSGene26082
GENETestsDKFZP434L187
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease26082
BioCentury BCIQDKFZP434L187
ClinGenDKFZP434L187
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26082
Clinical trialDKFZP434L187
Miscellaneous
canSAR (ICR)DKFZP434L187 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDKFZP434L187
EVEXDKFZP434L187
GoPubMedDKFZP434L187
iHOPDKFZP434L187
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:01:44 CET 2017

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