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DLEU1 (deleted in lymphocytic leukemia 1 (non-protein coding))

Identity

Alias_namesDLB1
BCMS
deleted in lymphocytic leukemia 1 (non-protein coding)
Alias_symbol (synonym)LEU1
XTP6
NCRNA00021
LINC00021
BCMS1
Other aliasDLEU2
LEU2
HGNC (Hugo) DLEU1
LocusID (NCBI) 10301
Atlas_Id 40330
Location 13q14.2  [Link to chromosome band 13q14]
Location_base_pair Starts at 50082437 and ends at 50104819 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DLEU1 (13q14.2) / ATP5S (14q21.3)DLEU1 (13q14.2) / DLEU1 (13q14.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  del(13q) in chronic lymphocytic leukemia


External links

Nomenclature
HGNC (Hugo)DLEU1   13747
Cards
Entrez_Gene (NCBI)DLEU1  10301  deleted in lymphocytic leukemia 1 (non-protein coding)
AliasesBCMS; BCMS1; DLB1; DLEU2; 
LEU1; LEU2; LINC00021; NCRNA00021; XTP6
GeneCards (Weizmann)DLEU1
Ensembl hg19 (Hinxton)ENSG00000176124 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176124 [Gene_View]  chr13:50082437-50104819 [Contig_View]  DLEU1 [Vega]
ICGC DataPortalENSG00000176124
TCGA cBioPortalDLEU1
AceView (NCBI)DLEU1
Genatlas (Paris)DLEU1
WikiGenes10301
SOURCE (Princeton)DLEU1
Genetics Home Reference (NIH)DLEU1
Genomic and cartography
GoldenPath hg38 (UCSC)DLEU1  -     chr13:50082437-50104819 +  13q14.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DLEU1  -     13q14.2   [Description]    (hg19-Feb_2009)
EnsemblDLEU1 - 13q14.2 [CytoView hg19]  DLEU1 - 13q14.2 [CytoView hg38]
Mapping of homologs : NCBIDLEU1 [Mapview hg19]  DLEU1 [Mapview hg38]
OMIM605765   
Gene and transcription
Genbank (Entrez)###############################################################################################################################################################################################################################################################
RefSeq transcript (Entrez)NM_005887
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DLEU1
Cluster EST : UnigeneHs.712880 [ NCBI ]
CGAP (NCI)Hs.712880
Alternative Splicing GalleryENSG00000176124
Gene ExpressionDLEU1 [ NCBI-GEO ]   DLEU1 [ EBI - ARRAY_EXPRESS ]   DLEU1 [ SEEK ]   DLEU1 [ MEM ]
Gene Expression Viewer (FireBrowse)DLEU1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10301
GTEX Portal (Tissue expression)DLEU1
Protein : pattern, domain, 3D structure
UniProt/SwissProtO43261   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO43261  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO43261
Splice isoforms : SwissVarO43261
PhosPhoSitePlusO43261
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DLEU1
DMDM Disease mutations10301
Blocks (Seattle)DLEU1
SuperfamilyO43261
Human Protein AtlasENSG00000176124
Peptide AtlasO43261
HPRD16150
IPIIPI00180736   
Protein Interaction databases
DIP (DOE-UCLA)O43261
IntAct (EBI)O43261
FunCoupENSG00000176124
BioGRIDDLEU1
STRING (EMBL)DLEU1
ZODIACDLEU1
Ontologies - Pathways
QuickGOO43261
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkDLEU1
Atlas of Cancer Signalling NetworkDLEU1
Wikipedia pathwaysDLEU1
Orthology - Evolution
OrthoDB10301
GeneTree (enSembl)ENSG00000176124
Phylogenetic Trees/Animal Genes : TreeFamDLEU1
HOVERGENO43261
HOGENOMO43261
Homologs : HomoloGeneDLEU1
Homology/Alignments : Family Browser (UCSC)DLEU1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDLEU1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DLEU1
dbVarDLEU1
ClinVarDLEU1
1000_GenomesDLEU1 
Exome Variant ServerDLEU1
ExAC (Exome Aggregation Consortium)DLEU1 (select the gene name)
Genetic variants : HAPMAP10301
Genomic Variants (DGV)DLEU1 [DGVbeta]
DECIPHERDLEU1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDLEU1 
Mutations
ICGC Data PortalDLEU1 
TCGA Data PortalDLEU1 
Broad Tumor PortalDLEU1
OASIS PortalDLEU1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDLEU1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDLEU1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DLEU1
DgiDB (Drug Gene Interaction Database)DLEU1
DoCM (Curated mutations)DLEU1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DLEU1 (select a term)
intoGenDLEU1
Cancer3DDLEU1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605765   
Orphanet
MedgenDLEU1
Genetic Testing Registry DLEU1
NextProtO43261 [Medical]
TSGene10301
GENETestsDLEU1
Target ValidationDLEU1
Huge Navigator DLEU1 [HugePedia]
snp3D : Map Gene to Disease10301
BioCentury BCIQDLEU1
ClinGenDLEU1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10301
Chemical/Pharm GKB GenePA27354
Clinical trialDLEU1
Miscellaneous
canSAR (ICR)DLEU1 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDLEU1
EVEXDLEU1
GoPubMedDLEU1
iHOPDLEU1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:31:16 CEST 2017

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