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DLGAP2 (discs, large (Drosophila) homolog-associated protein 2)

Identity

Alias_namesdiscs, large (Drosophila) homolog-associated protein 2
discs large homolog associated protein 2
Alias_symbol (synonym)DAP-2
Other aliasDAP2
SAPAP2
HGNC (Hugo) DLGAP2
LocusID (NCBI) 9228
Atlas_Id 62524
Location 8p23.3  [Link to chromosome band 8p23]
Location_base_pair Starts at 1449532 and ends at 1656642 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ABCC3 (17q21.33) / DLGAP2 (8p23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DLGAP2   2906
Cards
Entrez_Gene (NCBI)DLGAP2  9228  discs, large (Drosophila) homolog-associated protein 2
AliasesDAP2; SAPAP2
GeneCards (Weizmann)DLGAP2
Ensembl hg19 (Hinxton)ENSG00000198010 [Gene_View]  chr8:1449532-1656642 [Contig_View]  DLGAP2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000198010 [Gene_View]  chr8:1449532-1656642 [Contig_View]  DLGAP2 [Vega]
ICGC DataPortalENSG00000198010
TCGA cBioPortalDLGAP2
AceView (NCBI)DLGAP2
Genatlas (Paris)DLGAP2
WikiGenes9228
SOURCE (Princeton)DLGAP2
Genetics Home Reference (NIH)DLGAP2
Genomic and cartography
GoldenPath hg19 (UCSC)DLGAP2  -     chr8:1449532-1656642 +  8p23.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DLGAP2  -     8p23.3   [Description]    (hg38-Dec_2013)
EnsemblDLGAP2 - 8p23.3 [CytoView hg19]  DLGAP2 - 8p23.3 [CytoView hg38]
Mapping of homologs : NCBIDLGAP2 [Mapview hg19]  DLGAP2 [Mapview hg38]
OMIM605438   
Gene and transcription
Genbank (Entrez)AA443942 AA444121 AB000275 AF009204 AF119817
RefSeq transcript (Entrez)NM_001277161 NM_004745
RefSeq genomic (Entrez)NC_000008 NC_018919 NG_009409 NT_023736 NT_187565 NT_187654 NT_187680 NW_004929335
Consensus coding sequences : CCDS (NCBI)DLGAP2
Cluster EST : UnigeneHs.113287 [ NCBI ]
CGAP (NCI)Hs.113287
Alternative Splicing GalleryENSG00000198010
Gene ExpressionDLGAP2 [ NCBI-GEO ]   DLGAP2 [ EBI - ARRAY_EXPRESS ]   DLGAP2 [ SEEK ]   DLGAP2 [ MEM ]
Gene Expression Viewer (FireBrowse)DLGAP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9228
GTEX Portal (Tissue expression)DLGAP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P1A6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P1A6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P1A6
Splice isoforms : SwissVarQ9P1A6
PhosPhoSitePlusQ9P1A6
Domains : Interpro (EBI)DLGAP2    SAPAP   
Domain families : Pfam (Sanger)GKAP (PF03359)   
Domain families : Pfam (NCBI)pfam03359   
Conserved Domain (NCBI)DLGAP2
DMDM Disease mutations9228
Blocks (Seattle)DLGAP2
SuperfamilyQ9P1A6
Human Protein AtlasENSG00000198010
Peptide AtlasQ9P1A6
HPRD09258
IPIIPI00033086   IPI00221115   IPI00221116   
Protein Interaction databases
DIP (DOE-UCLA)Q9P1A6
IntAct (EBI)Q9P1A6
FunCoupENSG00000198010
BioGRIDDLGAP2
STRING (EMBL)DLGAP2
ZODIACDLGAP2
Ontologies - Pathways
QuickGOQ9P1A6
Ontology : AmiGOprotein binding  neurofilament  neuron-neuron synaptic transmission  postsynaptic density  cell junction  postsynaptic membrane  
Ontology : EGO-EBIprotein binding  neurofilament  neuron-neuron synaptic transmission  postsynaptic density  cell junction  postsynaptic membrane  
NDEx NetworkDLGAP2
Atlas of Cancer Signalling NetworkDLGAP2
Wikipedia pathwaysDLGAP2
Orthology - Evolution
OrthoDB9228
GeneTree (enSembl)ENSG00000198010
Phylogenetic Trees/Animal Genes : TreeFamDLGAP2
HOVERGENQ9P1A6
HOGENOMQ9P1A6
Homologs : HomoloGeneDLGAP2
Homology/Alignments : Family Browser (UCSC)DLGAP2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDLGAP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DLGAP2
dbVarDLGAP2
ClinVarDLGAP2
1000_GenomesDLGAP2 
Exome Variant ServerDLGAP2
ExAC (Exome Aggregation Consortium)DLGAP2 (select the gene name)
Genetic variants : HAPMAP9228
Genomic Variants (DGV)DLGAP2 [DGVbeta]
DECIPHER (Syndromes)8:1449532-1656642  ENSG00000198010
CONAN: Copy Number AnalysisDLGAP2 
Mutations
ICGC Data PortalDLGAP2 
TCGA Data PortalDLGAP2 
Broad Tumor PortalDLGAP2
OASIS PortalDLGAP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDLGAP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDLGAP2
BioMutasearch DLGAP2
DgiDB (Drug Gene Interaction Database)DLGAP2
DoCM (Curated mutations)DLGAP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DLGAP2 (select a term)
intoGenDLGAP2
Cancer3DDLGAP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605438   
Orphanet
MedgenDLGAP2
Genetic Testing Registry DLGAP2
NextProtQ9P1A6 [Medical]
TSGene9228
GENETestsDLGAP2
Huge Navigator DLGAP2 [HugePedia]
snp3D : Map Gene to Disease9228
BioCentury BCIQDLGAP2
ClinGenDLGAP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9228
Chemical/Pharm GKB GenePA27362
Clinical trialDLGAP2
Miscellaneous
canSAR (ICR)DLGAP2 (select the gene name)
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDLGAP2
EVEXDLGAP2
GoPubMedDLGAP2
iHOPDLGAP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:01:50 CET 2017

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