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DMAC2 (distal membrane arm assembly complex 2)

Identity

Alias_namesATP5SL
ATP5S like
Alias_symbol (synonym)FLJ10241
Other alias
HGNC (Hugo) DMAC2
LocusID (NCBI) 55101
Atlas_Id 78860
Location 19q13.2  [Link to chromosome band 19q13]
Location_base_pair Starts at 41431318 and ends at 41439576 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)DMAC2   25496
Cards
Entrez_Gene (NCBI)DMAC2  55101  distal membrane arm assembly complex 2
AliasesATP5SL
GeneCards (Weizmann)DMAC2
Ensembl hg19 (Hinxton)ENSG00000105341 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000105341 [Gene_View]  chr19:41431318-41439576 [Contig_View]  DMAC2 [Vega]
ICGC DataPortalENSG00000105341
TCGA cBioPortalDMAC2
AceView (NCBI)DMAC2
Genatlas (Paris)DMAC2
WikiGenes55101
SOURCE (Princeton)DMAC2
Genetics Home Reference (NIH)DMAC2
Genomic and cartography
GoldenPath hg38 (UCSC)DMAC2  -     chr19:41431318-41439576 -  19q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DMAC2  -     19q13.2   [Description]    (hg19-Feb_2009)
EnsemblDMAC2 - 19q13.2 [CytoView hg19]  DMAC2 - 19q13.2 [CytoView hg38]
Mapping of homologs : NCBIDMAC2 [Mapview hg19]  DMAC2 [Mapview hg38]
OMIM617262   
Gene and transcription
Genbank (Entrez)AK001103 AK055565 AK123631 AK293132 AK294249
RefSeq transcript (Entrez)NM_001167867 NM_001167868 NM_001167869 NM_001167870 NM_001167871 NM_001320838 NM_001320839 NM_001320840 NM_001320841 NM_001320844 NM_018035
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DMAC2
Cluster EST : UnigeneHs.351099 [ NCBI ]
CGAP (NCI)Hs.351099
Alternative Splicing GalleryENSG00000105341
Gene ExpressionDMAC2 [ NCBI-GEO ]   DMAC2 [ EBI - ARRAY_EXPRESS ]   DMAC2 [ SEEK ]   DMAC2 [ MEM ]
Gene Expression Viewer (FireBrowse)DMAC2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55101
GTEX Portal (Tissue expression)DMAC2
Human Protein AtlasENSG00000105341-DMAC2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NW81   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NW81  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NW81
Splice isoforms : SwissVarQ9NW81
PhosPhoSitePlusQ9NW81
Domains : Interpro (EBI)L_dom-like   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DMAC2
DMDM Disease mutations55101
Blocks (Seattle)DMAC2
SuperfamilyQ9NW81
Human Protein Atlas [tissue]ENSG00000105341-DMAC2 [tissue]
Peptide AtlasQ9NW81
IPIIPI00942215   IPI00060651   IPI01018713   IPI00301428   IPI01015373   IPI00910761   IPI00954476   IPI00910289   
Protein Interaction databases
DIP (DOE-UCLA)Q9NW81
IntAct (EBI)Q9NW81
FunCoupENSG00000105341
BioGRIDDMAC2
STRING (EMBL)DMAC2
ZODIACDMAC2
Ontologies - Pathways
QuickGOQ9NW81
Ontology : AmiGOmitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I assembly  
Ontology : EGO-EBImitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I assembly  
NDEx NetworkDMAC2
Atlas of Cancer Signalling NetworkDMAC2
Wikipedia pathwaysDMAC2
Orthology - Evolution
OrthoDB55101
GeneTree (enSembl)ENSG00000105341
Phylogenetic Trees/Animal Genes : TreeFamDMAC2
HOVERGENQ9NW81
HOGENOMQ9NW81
Homologs : HomoloGeneDMAC2
Homology/Alignments : Family Browser (UCSC)DMAC2
Gene fusions - Rearrangements
Tumor Fusion PortalDMAC2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDMAC2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DMAC2
dbVarDMAC2
ClinVarDMAC2
1000_GenomesDMAC2 
Exome Variant ServerDMAC2
ExAC (Exome Aggregation Consortium)ENSG00000105341
GNOMAD BrowserENSG00000105341
Genetic variants : HAPMAP55101
Genomic Variants (DGV)DMAC2 [DGVbeta]
DECIPHERDMAC2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDMAC2 
Mutations
ICGC Data PortalDMAC2 
TCGA Data PortalDMAC2 
Broad Tumor PortalDMAC2
OASIS PortalDMAC2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDDMAC2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DMAC2
DgiDB (Drug Gene Interaction Database)DMAC2
DoCM (Curated mutations)DMAC2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DMAC2 (select a term)
intoGenDMAC2
Cancer3DDMAC2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617262   
Orphanet
DisGeNETDMAC2
MedgenDMAC2
Genetic Testing Registry DMAC2
NextProtQ9NW81 [Medical]
TSGene55101
GENETestsDMAC2
Target ValidationDMAC2
Huge Navigator DMAC2 [HugePedia]
snp3D : Map Gene to Disease55101
BioCentury BCIQDMAC2
ClinGenDMAC2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55101
Chemical/Pharm GKB GenePA162377263
Clinical trialDMAC2
Miscellaneous
canSAR (ICR)DMAC2 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDMAC2
EVEXDMAC2
GoPubMedDMAC2
iHOPDMAC2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:38:27 CET 2017

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