Atlas of Genetics and Cytogenetics in Oncology and Haematology


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DMKN (dermokine)

Identity

Alias_symbol (synonym)ZD52F10
Other aliasUNQ729
HGNC (Hugo) DMKN
LocusID (NCBI) 93099
Atlas_Id 53153
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 35988119 and ends at 35992813 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
DMKN (19q13.12) / KRTDAP (19q13.12)LOC100507412 (-) / DMKN (19q13.12)ZNF703 (8p11.23) / DMKN (19q13.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DMKN   25063
Cards
Entrez_Gene (NCBI)DMKN  93099  dermokine
AliasesUNQ729; ZD52F10
GeneCards (Weizmann)DMKN
Ensembl hg19 (Hinxton)ENSG00000161249 [Gene_View]  chr19:35988119-35992813 [Contig_View]  DMKN [Vega]
Ensembl hg38 (Hinxton)ENSG00000161249 [Gene_View]  chr19:35988119-35992813 [Contig_View]  DMKN [Vega]
ICGC DataPortalENSG00000161249
TCGA cBioPortalDMKN
AceView (NCBI)DMKN
Genatlas (Paris)DMKN
WikiGenes93099
SOURCE (Princeton)DMKN
Genetics Home Reference (NIH)DMKN
Genomic and cartography
GoldenPath hg19 (UCSC)DMKN  -     chr19:35988119-35992813 -  19q13.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DMKN  -     19q13.12   [Description]    (hg38-Dec_2013)
EnsemblDMKN - 19q13.12 [CytoView hg19]  DMKN - 19q13.12 [CytoView hg38]
Mapping of homologs : NCBIDMKN [Mapview hg19]  DMKN [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF086315 AI914430 AK096215 AK125695 AK304668
RefSeq transcript (Entrez)NM_001035516 NM_001126056 NM_001126057 NM_001126058 NM_001126059 NM_001190347 NM_001190348 NM_001190349 NM_001308380 NM_001308383 NM_033317
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)DMKN
Cluster EST : UnigeneHs.417795 [ NCBI ]
CGAP (NCI)Hs.417795
Alternative Splicing GalleryENSG00000161249
Gene ExpressionDMKN [ NCBI-GEO ]   DMKN [ EBI - ARRAY_EXPRESS ]   DMKN [ SEEK ]   DMKN [ MEM ]
Gene Expression Viewer (FireBrowse)DMKN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)93099
GTEX Portal (Tissue expression)DMKN
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6E0U4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6E0U4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6E0U4
Splice isoforms : SwissVarQ6E0U4
PhosPhoSitePlusQ6E0U4
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DMKN
DMDM Disease mutations93099
Blocks (Seattle)DMKN
PDB (SRS)4F20   
PDB (PDBSum)4F20   
PDB (IMB)4F20   
PDB (RSDB)4F20   
Structural Biology KnowledgeBase4F20   
SCOP (Structural Classification of Proteins)4F20   
CATH (Classification of proteins structures)4F20   
SuperfamilyQ6E0U4
Human Protein AtlasENSG00000161249
Peptide AtlasQ6E0U4
HPRD12387
IPIIPI00454602   IPI00890762   IPI00644999   IPI00890785   IPI00305018   IPI00454603   IPI00890761   IPI00890826   IPI00890701   IPI00890700   IPI00873051   IPI00890724   IPI00890714   IPI00854861   IPI00942197   IPI01009810   IPI00927520   IPI00925637   IPI00925414   IPI00924957   IPI00890760   IPI00926134   IPI00925960   
Protein Interaction databases
DIP (DOE-UCLA)Q6E0U4
IntAct (EBI)Q6E0U4
FunCoupENSG00000161249
BioGRIDDMKN
STRING (EMBL)DMKN
ZODIACDMKN
Ontologies - Pathways
QuickGOQ6E0U4
Ontology : AmiGOprotein binding  extracellular exosome  
Ontology : EGO-EBIprotein binding  extracellular exosome  
NDEx NetworkDMKN
Atlas of Cancer Signalling NetworkDMKN
Wikipedia pathwaysDMKN
Orthology - Evolution
OrthoDB93099
GeneTree (enSembl)ENSG00000161249
Phylogenetic Trees/Animal Genes : TreeFamDMKN
HOVERGENQ6E0U4
HOGENOMQ6E0U4
Homologs : HomoloGeneDMKN
Homology/Alignments : Family Browser (UCSC)DMKN
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDMKN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DMKN
dbVarDMKN
ClinVarDMKN
1000_GenomesDMKN 
Exome Variant ServerDMKN
ExAC (Exome Aggregation Consortium)DMKN (select the gene name)
Genetic variants : HAPMAP93099
Genomic Variants (DGV)DMKN [DGVbeta]
DECIPHER (Syndromes)19:35988119-35992813  ENSG00000161249
CONAN: Copy Number AnalysisDMKN 
Mutations
ICGC Data PortalDMKN 
TCGA Data PortalDMKN 
Broad Tumor PortalDMKN
OASIS PortalDMKN [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDMKN  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDMKN
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DMKN
DgiDB (Drug Gene Interaction Database)DMKN
DoCM (Curated mutations)DMKN (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DMKN (select a term)
intoGenDMKN
Cancer3DDMKN(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDMKN
Genetic Testing Registry DMKN
NextProtQ6E0U4 [Medical]
TSGene93099
GENETestsDMKN
Huge Navigator DMKN [HugePedia]
snp3D : Map Gene to Disease93099
BioCentury BCIQDMKN
ClinGenDMKN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD93099
Chemical/Pharm GKB GenePA145149020
Clinical trialDMKN
Miscellaneous
canSAR (ICR)DMKN (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDMKN
EVEXDMKN
GoPubMedDMKN
iHOPDMKN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 30 14:59:01 CEST 2017

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