Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

DNAH12 (dynein axonemal heavy chain 12)

Identity

Alias_namesDNHD2
DNAH12L
DNAH7L
dynein, axonemal, heavy polypeptide 12
dynein heavy chain domain 2
dynein heavy domain 2
dynein, axonemal, heavy chain 12-like
dynein, axonemal, heavy chain 7-like
Alias_symbol (synonym)DLP12
Dnahc3
HL-19
hdhc3
DHC3
FLJ40427
FLJ44290
Other aliasDLP3
DNAHC12
DNAHC3
HDHC3
HL19
HGNC (Hugo) DNAH12
LocusID (NCBI) 201625
Atlas_Id 47633
Location 3p14.3  [Link to chromosome band 3p14]
Location_base_pair Starts at 57293699 and ends at 57544344 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ANXA7 (10q22.2) / DNAH12 (3p14.3)DNAH12 (3p14.3) / FUT10 (8p12)DNAH12 (3p14.3) / WHSC1 (4p16.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNAH12   2943
Cards
Entrez_Gene (NCBI)DNAH12  201625  dynein axonemal heavy chain 12
AliasesDHC3; DLP12; DLP3; DNAH12L; 
DNAH7L; DNAHC12; DNAHC3; DNHD2; HDHC3; HL-19; HL19
GeneCards (Weizmann)DNAH12
Ensembl hg19 (Hinxton)ENSG00000174844 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000174844 [Gene_View]  chr3:57293699-57544344 [Contig_View]  DNAH12 [Vega]
ICGC DataPortalENSG00000174844
TCGA cBioPortalDNAH12
AceView (NCBI)DNAH12
Genatlas (Paris)DNAH12
WikiGenes201625
SOURCE (Princeton)DNAH12
Genetics Home Reference (NIH)DNAH12
Genomic and cartography
GoldenPath hg38 (UCSC)DNAH12  -     chr3:57293699-57544344 -  3p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNAH12  -     3p14.3   [Description]    (hg19-Feb_2009)
EnsemblDNAH12 - 3p14.3 [CytoView hg19]  DNAH12 - 3p14.3 [CytoView hg38]
Mapping of homologs : NCBIDNAH12 [Mapview hg19]  DNAH12 [Mapview hg38]
OMIM603340   
Gene and transcription
Genbank (Entrez)AK097746 AK126276 AK128592 CD684932 CD708076
RefSeq transcript (Entrez)NM_001291661 NM_178504 NM_198564
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DNAH12
Cluster EST : UnigeneHs.201378 [ NCBI ]
CGAP (NCI)Hs.201378
Alternative Splicing GalleryENSG00000174844
Gene ExpressionDNAH12 [ NCBI-GEO ]   DNAH12 [ EBI - ARRAY_EXPRESS ]   DNAH12 [ SEEK ]   DNAH12 [ MEM ]
Gene Expression Viewer (FireBrowse)DNAH12 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)201625
GTEX Portal (Tissue expression)DNAH12
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZR08   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZR08  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZR08
Splice isoforms : SwissVarQ6ZR08
PhosPhoSitePlusQ6ZR08
Domains : Interpro (EBI)AAA+_ATPase    ATPase_dyneun-rel_AAA    DHC_fam    Dynein_heavy_chain_D4_dom    Dynein_heavy_dom    Dynein_heavy_dom-2    P-loop_NTPase   
Domain families : Pfam (Sanger)AAA_5 (PF07728)    AAA_8 (PF12780)    DHC_N2 (PF08393)    Dynein_heavy (PF03028)   
Domain families : Pfam (NCBI)pfam07728    pfam12780    pfam08393    pfam03028   
Domain families : Smart (EMBL)AAA (SM00382)  
Conserved Domain (NCBI)DNAH12
DMDM Disease mutations201625
Blocks (Seattle)DNAH12
SuperfamilyQ6ZR08
Human Protein AtlasENSG00000174844
Peptide AtlasQ6ZR08
HPRD08281
IPIIPI00412106   IPI00787295   IPI00927899   IPI00394869   IPI00783897   IPI00945214   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZR08
IntAct (EBI)Q6ZR08
FunCoupENSG00000174844
BioGRIDDNAH12
STRING (EMBL)DNAH12
ZODIACDNAH12
Ontologies - Pathways
QuickGOQ6ZR08
Ontology : AmiGOmicrotubule motor activity  ATP binding  cytoplasm  microtubule  cilium  microtubule-based movement  ATPase activity  dynein complex  
Ontology : EGO-EBImicrotubule motor activity  ATP binding  cytoplasm  microtubule  cilium  microtubule-based movement  ATPase activity  dynein complex  
NDEx NetworkDNAH12
Atlas of Cancer Signalling NetworkDNAH12
Wikipedia pathwaysDNAH12
Orthology - Evolution
OrthoDB201625
GeneTree (enSembl)ENSG00000174844
Phylogenetic Trees/Animal Genes : TreeFamDNAH12
HOVERGENQ6ZR08
HOGENOMQ6ZR08
Homologs : HomoloGeneDNAH12
Homology/Alignments : Family Browser (UCSC)DNAH12
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNAH12 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNAH12
dbVarDNAH12
ClinVarDNAH12
1000_GenomesDNAH12 
Exome Variant ServerDNAH12
ExAC (Exome Aggregation Consortium)DNAH12 (select the gene name)
Genetic variants : HAPMAP201625
Genomic Variants (DGV)DNAH12 [DGVbeta]
DECIPHERDNAH12 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNAH12 
Mutations
ICGC Data PortalDNAH12 
TCGA Data PortalDNAH12 
Broad Tumor PortalDNAH12
OASIS PortalDNAH12 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNAH12  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDNAH12
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DNAH12
DgiDB (Drug Gene Interaction Database)DNAH12
DoCM (Curated mutations)DNAH12 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNAH12 (select a term)
intoGenDNAH12
Cancer3DDNAH12(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603340   
Orphanet
MedgenDNAH12
Genetic Testing Registry DNAH12
NextProtQ6ZR08 [Medical]
TSGene201625
GENETestsDNAH12
Target ValidationDNAH12
Huge Navigator DNAH12 [HugePedia]
snp3D : Map Gene to Disease201625
BioCentury BCIQDNAH12
ClinGenDNAH12
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD201625
Chemical/Pharm GKB GenePA27397
Clinical trialDNAH12
Miscellaneous
canSAR (ICR)DNAH12 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNAH12
EVEXDNAH12
GoPubMedDNAH12
iHOPDNAH12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 25 19:05:37 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.