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DNAH9 (dynein axonemal heavy chain 9)

Identity

Alias_namesDNAH17L
dynein, axonemal, heavy polypeptide 17-like
dynein, axonemal, heavy polypeptide 9
Alias_symbol (synonym)Dnahc9
KIAA0357
HL20
HL-20
DNAL1
DYH9
Other aliasDNEL1
HGNC (Hugo) DNAH9
LocusID (NCBI) 1770
Atlas_Id 62556
Location 17p12  [Link to chromosome band 17p12]
Location_base_pair Starts at 11598431 and ends at 11969748 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MAP2K4 (17p12) / DNAH9 (17p12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNAH9   2953
Cards
Entrez_Gene (NCBI)DNAH9  1770  dynein axonemal heavy chain 9
AliasesDNAH17L; DNEL1; DYH9; Dnahc9; 
HL-20; HL20
GeneCards (Weizmann)DNAH9
Ensembl hg19 (Hinxton)ENSG00000007174 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000007174 [Gene_View]  chr17:11598431-11969748 [Contig_View]  DNAH9 [Vega]
ICGC DataPortalENSG00000007174
TCGA cBioPortalDNAH9
AceView (NCBI)DNAH9
Genatlas (Paris)DNAH9
WikiGenes1770
SOURCE (Princeton)DNAH9
Genetics Home Reference (NIH)DNAH9
Genomic and cartography
GoldenPath hg38 (UCSC)DNAH9  -     chr17:11598431-11969748 +  17p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNAH9  -     17p12   [Description]    (hg19-Feb_2009)
EnsemblDNAH9 - 17p12 [CytoView hg19]  DNAH9 - 17p12 [CytoView hg38]
Mapping of homologs : NCBIDNAH9 [Mapview hg19]  DNAH9 [Mapview hg38]
OMIM603330   
Gene and transcription
Genbank (Entrez)AB002355 AB290158 AF015265 AF257737 AJ132088
RefSeq transcript (Entrez)NM_001372 NM_004662
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DNAH9
Cluster EST : UnigeneHs.567259 [ NCBI ]
CGAP (NCI)Hs.567259
Alternative Splicing GalleryENSG00000007174
Gene ExpressionDNAH9 [ NCBI-GEO ]   DNAH9 [ EBI - ARRAY_EXPRESS ]   DNAH9 [ SEEK ]   DNAH9 [ MEM ]
Gene Expression Viewer (FireBrowse)DNAH9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines] &fbsp[cancer]  [perturbations]  
BioGPS (Tissue expression)1770
GTEX Portal (Tissue expression)DNAH9
Human Protein AtlasENSG00000007174-DNAH9 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NYC9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NYC9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NYC9
Splice isoforms : SwissVarQ9NYC9
PhosPhoSitePlusQ9NYC9
Domains : Interpro (EBI)AAA+_ATPase    ATPase_dyneun-rel_AAA    DHC_fam    Dynein_HC_stalk    Dynein_heavy_chain_D4_dom    Dynein_heavy_dom    Dynein_heavy_dom-1    Dynein_heavy_dom-2    P-loop_NTPase   
Domain families : Pfam (Sanger)AAA_5 (PF07728)    AAA_8 (PF12780)    DHC_N1 (PF08385)    DHC_N2 (PF08393)    Dynein_heavy (PF03028)    MT (PF12777)   
Domain families : Pfam (NCBI)pfam07728    pfam12780    pfam08385    pfam08393    pfam03028    pfam12777   
Domain families : Smart (EMBL)AAA (SM00382)  
Conserved Domain (NCBI)DNAH9
DMDM Disease mutations1770
Blocks (Seattle)DNAH9
SuperfamilyQ9NYC9
Human Protein Atlas [tissue]ENSG00000007174-DNAH9 [tissue]
Peptide AtlasQ9NYC9
HPRD04511
IPIIPI00302453   IPI00795394   IPI00922629   IPI00985458   IPI00005823   
Protein Interaction databases
DIP (DOE-UCLA)Q9NYC9
IntAct (EBI)Q9NYC9
FunCoupENSG00000007174
BioGRIDDNAH9
STRING (EMBL)DNAH9
ZODIACDNAH9
Ontologies - Pathways
QuickGOQ9NYC9
Ontology : AmiGOmicrotubule motor activity  ATP binding  cytoplasm  microtubule  axoneme  microtubule-based movement  ATPase activity  cell projection organization  dynein complex  
Ontology : EGO-EBImicrotubule motor activity  ATP binding  cytoplasm  microtubule  axoneme  microtubule-based movement  ATPase activity  cell projection organization  dynein complex  
NDEx NetworkDNAH9
Atlas of Cancer Signalling NetworkDNAH9
Wikipedia pathwaysDNAH9
Orthology - Evolution
OrthoDB1770
GeneTree (enSembl)ENSG00000007174
Phylogenetic Trees/Animal Genes : TreeFamDNAH9
HOVERGENQ9NYC9
HOGENOMQ9NYC9
Homologs : HomoloGeneDNAH9
Homology/Alignments : Family Browser (UCSC)DNAH9
Gene fusions - Rearrangements
Fusion: Tumor Portal DNAH9
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNAH9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNAH9
dbVarDNAH9
ClinVarDNAH9
1000_GenomesDNAH9 
Exome Variant ServerDNAH9
ExAC (Exome Aggregation Consortium)ENSG00000007174
GNOMAD BrowserENSG00000007174
Genetic variants : HAPMAP1770
Genomic Variants (DGV)DNAH9 [DGVbeta]
DECIPHERDNAH9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNAH9 
Mutations
ICGC Data PortalDNAH9 
TCGA Data PortalDNAH9 
Broad Tumor PortalDNAH9
OASIS PortalDNAH9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNAH9  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDNAH9
(Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DNAH9
DgiDB (Drug Gene Interaction Database)DNAH9
DoCM (Curated mutations)DNAH9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNAH9 (select a term)
intoGenDNAH9
Cancer3DDNAH9(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603330   
Orphanet
MedgenDNAH9
Genetic Testing Registry DNAH9
NextProtQ9NYC9 [Medical]
TSGene1770
GENETestsDNAH9
Target ValidationDNAH9
Huge Navigator DNAH9 [HugePedia]
snp3D : Map Gene to Disease1770
BioCentury BCIQDNAH9
ClinGenDNAH9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD1770
Chemical/Pharm GKB GenePA27406
Clinical trialDNAH9
Miscellaneous
canSAR (ICR)DNAH9 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNAH9
EVEXDNAH9
GoPubMedDNAH9
iHOPDNAH9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:44:53 CET 2017

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