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DNAH9 (dynein axonemal heavy chain 9)

Identity

Alias (NCBI)CILD40
DNAH17L
DNEL1
DYH9
Dnahc9
HL-20
HL20
HGNC (Hugo) DNAH9
HGNC Alias symbDnahc9
KIAA0357
HL20
HL-20
DNAL1
DYH9
HGNC Previous nameDNAH17L
HGNC Previous namedynein, axonemal, heavy polypeptide 17-like
 dynein, axonemal, heavy polypeptide 9
LocusID (NCBI) 1770
Atlas_Id 62556
Location 17p12  [Link to chromosome band 17p12]
Location_base_pair Starts at 11882902 and ends at 11969748 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MAP2K4 (17p12) / DNAH9 (17p12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)DNAH9   2953
Cards
Entrez_Gene (NCBI)DNAH9    dynein axonemal heavy chain 9
AliasesCILD40; DNAH17L; DNEL1; DYH9; 
Dnahc9; HL-20; HL20
GeneCards (Weizmann)DNAH9
Ensembl hg19 (Hinxton)ENSG00000007174 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000007174 [Gene_View]  ENSG00000007174 [Sequence]  chr17:11882902-11969748 [Contig_View]  DNAH9 [Vega]
ICGC DataPortalENSG00000007174
TCGA cBioPortalDNAH9
AceView (NCBI)DNAH9
Genatlas (Paris)DNAH9
SOURCE (Princeton)DNAH9
Genetics Home Reference (NIH)DNAH9
Genomic and cartography
GoldenPath hg38 (UCSC)DNAH9  -     chr17:11882902-11969748 +  17p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNAH9  -     17p12   [Description]    (hg19-Feb_2009)
GoldenPathDNAH9 - 17p12 [CytoView hg19]  DNAH9 - 17p12 [CytoView hg38]
ImmunoBaseENSG00000007174
Genome Data Viewer NCBIDNAH9 [Mapview hg19]  
OMIM603330   618300   
Gene and transcription
Genbank (Entrez)AB002355 AB290158 AF015265 AF257737 AJ132088
RefSeq transcript (Entrez)NM_001372 NM_004662
Consensus coding sequences : CCDS (NCBI)DNAH9
Gene ExpressionDNAH9 [ NCBI-GEO ]   DNAH9 [ EBI - ARRAY_EXPRESS ]   DNAH9 [ SEEK ]   DNAH9 [ MEM ]
Gene Expression Viewer (FireBrowse)DNAH9 [ Firebrowse - Broad ]
GenevisibleExpression of DNAH9 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1770
GTEX Portal (Tissue expression)DNAH9
Human Protein AtlasENSG00000007174-DNAH9 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NYC9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NYC9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NYC9
PhosPhoSitePlusQ9NYC9
Domains : Interpro (EBI)AAA+_ATPase    AAA_6    AAA_9    AAA_lid_11    AAA_lid_11_sf    DHC_fam    DNAH3_AAA_lid_1    DNAH9-like    Dynein_2_C    Dynein_2_N    Dynein_AAA1S    Dynein_AAA5_ext    Dynein_C    Dynein_C_barrel    Dynein_HC_stalk    Dynein_heavy_chain_D4_dom    Dynein_heavy_D6_P-loop    Dynein_heavy_dom-1    Dynein_heavy_dom-2    P-loop_NTPase   
Domain families : Pfam (Sanger)AAA_6 (PF12774)    AAA_8 (PF12780)    AAA_9 (PF12781)    AAA_lid_1 (PF17857)    AAA_lid_11 (PF18198)    DHC_N1 (PF08385)    DHC_N2 (PF08393)    Dynein_AAA_lid (PF17852)    Dynein_C (PF18199)    Dynein_heavy (PF03028)    MT (PF12777)   
Domain families : Pfam (NCBI)pfam12774    pfam12780    pfam12781    pfam17857    pfam18198    pfam08385    pfam08393    pfam17852    pfam18199    pfam03028    pfam12777   
Domain families : Smart (EMBL)AAA (SM00382)  
Conserved Domain (NCBI)DNAH9
SuperfamilyQ9NYC9
AlphaFold pdb e-kbQ9NYC9   
Human Protein Atlas [tissue]ENSG00000007174-DNAH9 [tissue]
HPRD04511
Protein Interaction databases
DIP (DOE-UCLA)Q9NYC9
IntAct (EBI)Q9NYC9
BioGRIDDNAH9
STRING (EMBL)DNAH9
ZODIACDNAH9
Ontologies - Pathways
QuickGOQ9NYC9
Ontology : AmiGOcilium movement  cilium movement  protein binding  ATP binding  microtubule  axoneme  axoneme  microtubule-based movement  ATP-dependent microtubule motor activity, minus-end-directed  cell projection organization  dynein complex  motile cilium  motile cilium  outer dynein arm  dynein intermediate chain binding  dynein light intermediate chain binding  9+2 motile cilium  distal portion of axoneme  
Ontology : EGO-EBIcilium movement  cilium movement  protein binding  ATP binding  microtubule  axoneme  axoneme  microtubule-based movement  ATP-dependent microtubule motor activity, minus-end-directed  cell projection organization  dynein complex  motile cilium  motile cilium  outer dynein arm  dynein intermediate chain binding  dynein light intermediate chain binding  9+2 motile cilium  distal portion of axoneme  
NDEx NetworkDNAH9
Atlas of Cancer Signalling NetworkDNAH9
Wikipedia pathwaysDNAH9
Orthology - Evolution
OrthoDB1770
GeneTree (enSembl)ENSG00000007174
Phylogenetic Trees/Animal Genes : TreeFamDNAH9
Homologs : HomoloGeneDNAH9
Homology/Alignments : Family Browser (UCSC)DNAH9
Gene fusions - Rearrangements
Fusion : QuiverDNAH9
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNAH9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNAH9
dbVarDNAH9
ClinVarDNAH9
MonarchDNAH9
1000_GenomesDNAH9 
Exome Variant ServerDNAH9
GNOMAD BrowserENSG00000007174
Varsome BrowserDNAH9
ACMGDNAH9 variants
VarityQ9NYC9
Genomic Variants (DGV)DNAH9 [DGVbeta]
DECIPHERDNAH9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNAH9 
Mutations
ICGC Data PortalDNAH9 
TCGA Data PortalDNAH9 
Broad Tumor PortalDNAH9
OASIS PortalDNAH9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNAH9  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DDNAH9
Mutations and Diseases : HGMDDNAH9
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaDNAH9
DgiDB (Drug Gene Interaction Database)DNAH9
DoCM (Curated mutations)DNAH9
CIViC (Clinical Interpretations of Variants in Cancer)DNAH9
Cancer3DDNAH9
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603330    618300   
Orphanet
DisGeNETDNAH9
MedgenDNAH9
Genetic Testing Registry DNAH9
NextProtQ9NYC9 [Medical]
GENETestsDNAH9
Target ValidationDNAH9
Huge Navigator DNAH9 [HugePedia]
ClinGenDNAH9
Clinical trials, drugs, therapy
MyCancerGenomeDNAH9
Protein Interactions : CTDDNAH9
Pharm GKB GenePA27406
PharosQ9NYC9
Clinical trialDNAH9
Miscellaneous
canSAR (ICR)DNAH9
HarmonizomeDNAH9
DataMed IndexDNAH9
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXDNAH9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:48:09 CEST 2021

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