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DNAJB11 (DnaJ heat shock protein family (Hsp40) member B11)

Identity

Alias_namesDnaJ (Hsp40) homolog
Alias_symbol (synonym)EDJ
HEDJ
ERdj3
Other aliasABBP-2
ABBP2
DJ9
Dj-9
ERj3
ERj3p
PRO1080
UNQ537
HGNC (Hugo) DNAJB11
LocusID (NCBI) 51726
Atlas_Id 47317
Location 3q27.3  [Link to chromosome band 3q27]
Location_base_pair Starts at 186570676 and ends at 186585800 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CCPG1 (15q21.3) / DNAJB11 (3q27.3)DNAJB11 (3q27.3) / DNAJB11 (3q27.3)DNAJB11 (3q27.3) / IVNS1ABP (1q25.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNAJB11   14889
Cards
Entrez_Gene (NCBI)DNAJB11  51726  DnaJ heat shock protein family (Hsp40) member B11
AliasesABBP-2; ABBP2; DJ9; Dj-9; 
EDJ; ERdj3; ERj3; ERj3p; PRO1080; UNQ537
GeneCards (Weizmann)DNAJB11
Ensembl hg19 (Hinxton)ENSG00000090520 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000090520 [Gene_View]  chr3:186570676-186585800 [Contig_View]  DNAJB11 [Vega]
ICGC DataPortalENSG00000090520
TCGA cBioPortalDNAJB11
AceView (NCBI)DNAJB11
Genatlas (Paris)DNAJB11
WikiGenes51726
SOURCE (Princeton)DNAJB11
Genetics Home Reference (NIH)DNAJB11
Genomic and cartography
GoldenPath hg38 (UCSC)DNAJB11  -     chr3:186570676-186585800 +  3q27.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNAJB11  -     3q27.3   [Description]    (hg19-Feb_2009)
EnsemblDNAJB11 - 3q27.3 [CytoView hg19]  DNAJB11 - 3q27.3 [CytoView hg38]
Mapping of homologs : NCBIDNAJB11 [Mapview hg19]  DNAJB11 [Mapview hg38]
OMIM611341   
Gene and transcription
Genbank (Entrez)AB028859 AF228505 AF277317 AI446699 AJ250137
RefSeq transcript (Entrez)NM_016306
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DNAJB11
Cluster EST : UnigeneHs.712822 [ NCBI ]
CGAP (NCI)Hs.712822
Alternative Splicing GalleryENSG00000090520
Gene ExpressionDNAJB11 [ NCBI-GEO ]   DNAJB11 [ EBI - ARRAY_EXPRESS ]   DNAJB11 [ SEEK ]   DNAJB11 [ MEM ]
Gene Expression Viewer (FireBrowse)DNAJB11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51726
GTEX Portal (Tissue expression)DNAJB11
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UBS4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UBS4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UBS4
Splice isoforms : SwissVarQ9UBS4
PhosPhoSitePlusQ9UBS4
Domaine pattern : Prosite (Expaxy)DNAJ_1 (PS00636)    DNAJ_2 (PS50076)   
Domains : Interpro (EBI)DnaJ_C    DnaJ_domain    DnaJ_domain_CS    HSP40/DnaJ_pept-bd   
Domain families : Pfam (Sanger)DnaJ (PF00226)    DnaJ_C (PF01556)   
Domain families : Pfam (NCBI)pfam00226    pfam01556   
Domain families : Smart (EMBL)DnaJ (SM00271)  
Conserved Domain (NCBI)DNAJB11
DMDM Disease mutations51726
Blocks (Seattle)DNAJB11
SuperfamilyQ9UBS4
Human Protein AtlasENSG00000090520
Peptide AtlasQ9UBS4
HPRD07485
IPIIPI00008454   IPI01013094   IPI00927297   
Protein Interaction databases
DIP (DOE-UCLA)Q9UBS4
IntAct (EBI)Q9UBS4
FunCoupENSG00000090520
BioGRIDDNAJB11
STRING (EMBL)DNAJB11
ZODIACDNAJB11
Ontologies - Pathways
QuickGOQ9UBS4
Ontology : AmiGOprotein binding  endoplasmic reticulum  endoplasmic reticulum  endoplasmic reticulum lumen  protein folding  membrane  positive regulation of ATPase activity  IRE1-mediated unfolded protein response  unfolded protein binding  
Ontology : EGO-EBIprotein binding  endoplasmic reticulum  endoplasmic reticulum  endoplasmic reticulum lumen  protein folding  membrane  positive regulation of ATPase activity  IRE1-mediated unfolded protein response  unfolded protein binding  
Pathways : KEGGProtein processing in endoplasmic reticulum   
NDEx NetworkDNAJB11
Atlas of Cancer Signalling NetworkDNAJB11
Wikipedia pathwaysDNAJB11
Orthology - Evolution
OrthoDB51726
GeneTree (enSembl)ENSG00000090520
Phylogenetic Trees/Animal Genes : TreeFamDNAJB11
HOVERGENQ9UBS4
HOGENOMQ9UBS4
Homologs : HomoloGeneDNAJB11
Homology/Alignments : Family Browser (UCSC)DNAJB11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNAJB11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNAJB11
dbVarDNAJB11
ClinVarDNAJB11
1000_GenomesDNAJB11 
Exome Variant ServerDNAJB11
ExAC (Exome Aggregation Consortium)DNAJB11 (select the gene name)
Genetic variants : HAPMAP51726
Genomic Variants (DGV)DNAJB11 [DGVbeta]
DECIPHERDNAJB11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNAJB11 
Mutations
ICGC Data PortalDNAJB11 
TCGA Data PortalDNAJB11 
Broad Tumor PortalDNAJB11
OASIS PortalDNAJB11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNAJB11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDNAJB11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DNAJB11
DgiDB (Drug Gene Interaction Database)DNAJB11
DoCM (Curated mutations)DNAJB11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNAJB11 (select a term)
intoGenDNAJB11
Cancer3DDNAJB11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611341   
Orphanet
MedgenDNAJB11
Genetic Testing Registry DNAJB11
NextProtQ9UBS4 [Medical]
TSGene51726
GENETestsDNAJB11
Huge Navigator DNAJB11 [HugePedia]
snp3D : Map Gene to Disease51726
BioCentury BCIQDNAJB11
ClinGenDNAJB11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51726
Chemical/Pharm GKB GenePA27413
Clinical trialDNAJB11
Miscellaneous
canSAR (ICR)DNAJB11 (select the gene name)
Probes
Litterature
PubMed66 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNAJB11
EVEXDNAJB11
GoPubMedDNAJB11
iHOPDNAJB11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:13:31 CEST 2017

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