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DNAJB3 (DnaJ heat shock protein family (Hsp40) member B3)

Identity

Alias_namesDnaJ (Hsp40) homolog, subfamily B, member 3
Alias_symbol (synonym)HCG3
Other alias
HGNC (Hugo) DNAJB3
LocusID (NCBI) 414061
Atlas_Id 62560
Location 2q37.1  [Link to chromosome band 2q37]
Location_base_pair Starts at 233742750 and ends at 233744015 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNAJB3   32397
Cards
Entrez_Gene (NCBI)DNAJB3  414061  DnaJ heat shock protein family (Hsp40) member B3
AliasesHCG3
GeneCards (Weizmann)DNAJB3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:233742750-233744015 [Contig_View]  DNAJB3 [Vega]
TCGA cBioPortalDNAJB3
AceView (NCBI)DNAJB3
Genatlas (Paris)DNAJB3
WikiGenes414061
SOURCE (Princeton)DNAJB3
Genetics Home Reference (NIH)DNAJB3
Genomic and cartography
GoldenPath hg38 (UCSC)DNAJB3  -     chr2:233742750-233744015 -  2q37.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNAJB3  -     2q37.1   [Description]    (hg19-Feb_2009)
EnsemblDNAJB3 - 2q37.1 [CytoView hg19]  DNAJB3 - 2q37.1 [CytoView hg38]
Mapping of homologs : NCBIDNAJB3 [Mapview hg19]  DNAJB3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY083665 BC017590 BC024013 HQ448310
RefSeq transcript (Entrez)NM_001001394
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DNAJB3
Cluster EST : UnigeneHs.725533 [ NCBI ]
CGAP (NCI)Hs.725533
Gene ExpressionDNAJB3 [ NCBI-GEO ]   DNAJB3 [ EBI - ARRAY_EXPRESS ]   DNAJB3 [ SEEK ]   DNAJB3 [ MEM ]
Gene Expression Viewer (FireBrowse)DNAJB3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)414061
GTEX Portal (Tissue expression)DNAJB3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WWF6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WWF6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WWF6
Splice isoforms : SwissVarQ8WWF6
PhosPhoSitePlusQ8WWF6
Domaine pattern : Prosite (Expaxy)DNAJ_1 (PS00636)    DNAJ_2 (PS50076)   
Domains : Interpro (EBI)DnaJ_domain    DnaJ_domain_CS    DNAJC3   
Domain families : Pfam (Sanger)DnaJ (PF00226)   
Domain families : Pfam (NCBI)pfam00226   
Domain families : Smart (EMBL)DnaJ (SM00271)  
Conserved Domain (NCBI)DNAJB3
DMDM Disease mutations414061
Blocks (Seattle)DNAJB3
PDB (SRS)2EJ7   
PDB (PDBSum)2EJ7   
PDB (IMB)2EJ7   
PDB (RSDB)2EJ7   
Structural Biology KnowledgeBase2EJ7   
SCOP (Structural Classification of Proteins)2EJ7   
CATH (Classification of proteins structures)2EJ7   
SuperfamilyQ8WWF6
Peptide AtlasQ8WWF6
HPRD13638
IPIIPI00103326   
Protein Interaction databases
DIP (DOE-UCLA)Q8WWF6
IntAct (EBI)Q8WWF6
BioGRIDDNAJB3
STRING (EMBL)DNAJB3
ZODIACDNAJB3
Ontologies - Pathways
QuickGOQ8WWF6
Ontology : AmiGOextracellular exosome  
Ontology : EGO-EBIextracellular exosome  
NDEx NetworkDNAJB3
Atlas of Cancer Signalling NetworkDNAJB3
Wikipedia pathwaysDNAJB3
Orthology - Evolution
OrthoDB414061
Phylogenetic Trees/Animal Genes : TreeFamDNAJB3
HOVERGENQ8WWF6
HOGENOMQ8WWF6
Homologs : HomoloGeneDNAJB3
Homology/Alignments : Family Browser (UCSC)DNAJB3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNAJB3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNAJB3
dbVarDNAJB3
ClinVarDNAJB3
1000_GenomesDNAJB3 
Exome Variant ServerDNAJB3
ExAC (Exome Aggregation Consortium)DNAJB3 (select the gene name)
Genetic variants : HAPMAP414061
Genomic Variants (DGV)DNAJB3 [DGVbeta]
DECIPHERDNAJB3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNAJB3 
Mutations
ICGC Data PortalDNAJB3 
TCGA Data PortalDNAJB3 
Broad Tumor PortalDNAJB3
OASIS PortalDNAJB3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDDNAJB3
BioMutasearch DNAJB3
DgiDB (Drug Gene Interaction Database)DNAJB3
DoCM (Curated mutations)DNAJB3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNAJB3 (select a term)
intoGenDNAJB3
Cancer3DDNAJB3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDNAJB3
Genetic Testing Registry DNAJB3
NextProtQ8WWF6 [Medical]
TSGene414061
GENETestsDNAJB3
Target ValidationDNAJB3
Huge Navigator DNAJB3 [HugePedia]
snp3D : Map Gene to Disease414061
BioCentury BCIQDNAJB3
ClinGenDNAJB3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD414061
Chemical/Pharm GKB GenePA162383828
Clinical trialDNAJB3
Miscellaneous
canSAR (ICR)DNAJB3 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNAJB3
EVEXDNAJB3
GoPubMedDNAJB3
iHOPDNAJB3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:06:28 CEST 2017

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