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DNAJB4 (DnaJ (Hsp40) homolog, subfamily B, member 4)

Identity

Other namesDNAJW
DjB4
HLJ1
HGNC (Hugo) DNAJB4
LocusID (NCBI) 11080
Location 1p31.1
Location_base_pair Starts at 78470636 and ends at 78482995 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)DNAJB4   14886
Cards
Entrez_Gene (NCBI)DNAJB4  11080  DnaJ (Hsp40) homolog, subfamily B, member 4
GeneCards (Weizmann)DNAJB4
Ensembl (Hinxton) [Gene_View]  chr1:78470636-78482995 [Contig_View]  DNAJB4 [Vega]
AceView (NCBI)DNAJB4
Genatlas (Paris)DNAJB4
WikiGenes11080
SOURCE (Princeton)NM_007034
Genomic and cartography
GoldenPath (UCSC)DNAJB4  -  1p31.1   chr1:78470636-78482995 +  1p31.1   [Description]    (hg19-Feb_2009)
EnsemblDNAJB4 - 1p31.1 [CytoView]
Mapping of homologs : NCBIDNAJB4 [Mapview]
OMIM611327   
Gene and transcription
Genbank (Entrez)AB209922 AK297985 AK313205 BC034721 DQ891154
RefSeq transcript (Entrez)NM_007034
RefSeq genomic (Entrez)AC_000133 NC_000001 NC_018912 NT_032977 NW_001838579 NW_004929290
Consensus coding sequences : CCDS (NCBI)DNAJB4
Cluster EST : UnigeneHs.13852 [ NCBI ]
CGAP (NCI)Hs.13852
Alternative Splicing : Fast-db (Paris)GSHG0000645
Gene ExpressionDNAJB4 [ NCBI-GEO ]     DNAJB4 [ SEEK ]   DNAJB4 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UDY4 (Uniprot)
NextProtQ9UDY4  [Medical]
With graphics : InterProQ9UDY4
Splice isoforms : SwissVarQ9UDY4 (Swissvar)
Domaine pattern : Prosite (Expaxy)DNAJ_1 (PS00636)    DNAJ_2 (PS50076)   
Domains : Interpro (EBI)DnaJ_C    DnaJ_domain    DnaJ_domain_CS    HSP40/DnaJ_pept-bd   
Related proteins : CluSTrQ9UDY4
Domain families : Pfam (Sanger)CTDII (PF01556)    DnaJ (PF00226)   
Domain families : Pfam (NCBI)pfam01556    pfam00226   
Domain families : Smart (EMBL)DnaJ (SM00271)  
DMDM Disease mutations11080
Blocks (Seattle)Q9UDY4
Peptide AtlasQ9UDY4
HPRD07486
IPIIPI00003848   IPI00645574   
Protein Interaction databases
DIP (DOE-UCLA)Q9UDY4
IntAct (EBI)Q9UDY4
BioGRIDDNAJB4
IntegromeDBDNAJB4
STRING (EMBL)DNAJB4
Ontologies - Pathways
QuickGOQ9UDY4
Ontology : AmiGOprotein binding  nucleus  nucleolus  cytoplasm  cytosol  plasma membrane  protein folding  response to unfolded protein  response to heat  unfolded protein binding  chaperone binding  extracellular vesicular exosome  
Ontology : EGO-EBIprotein binding  nucleus  nucleolus  cytoplasm  cytosol  plasma membrane  protein folding  response to unfolded protein  response to heat  unfolded protein binding  chaperone binding  extracellular vesicular exosome  
Protein Interaction DatabaseDNAJB4
Wikipedia pathwaysDNAJB4
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)DNAJB4
SNP (GeneSNP Utah)DNAJB4
SNP : HGBaseDNAJB4
Genetic variants : HAPMAPDNAJB4
1000_GenomesDNAJB4 
CONAN: Copy Number AnalysisDNAJB4 
Somatic Mutations in Cancer : COSMICDNAJB4 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
DECIPHER (Syndromes)1:78470636-78482995
Mutations and Diseases : HGMDDNAJB4
OMIM611327   
MedgenDNAJB4
GENETestsDNAJB4
Disease Genetic AssociationDNAJB4
Huge Navigator DNAJB4 [HugePedia]  DNAJB4 [HugeCancerGEM]
Genomic VariantsDNAJB4  DNAJB4 [DGVbeta]
Exome VariantDNAJB4
dbVarDNAJB4
ClinVarDNAJB4
snp3D : Map Gene to Disease11080
General knowledge
Homologs : HomoloGeneDNAJB4
Homology/Alignments : Family Browser (UCSC)DNAJB4
Phylogenetic Trees/Animal Genes : TreeFamDNAJB4
Chemical/Protein Interactions : CTD11080
Chemical/Pharm GKB GenePA27416
Clinical trialDNAJB4
Other databases
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
CoreMineDNAJB4
GoPubMedDNAJB4
iHOPDNAJB4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Nov 8 17:22:25 CET 2014

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