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DNAJB7 (DnaJ heat shock protein family (Hsp40) member B7)

Identity

Other namesDJ5
HSC3
HGNC (Hugo) DNAJB7
LocusID (NCBI) 150353
Atlas_Id 46761
Location 22q13.2
Location_base_pair Starts at 41255554 and ends at 41258130 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
A2M (12p13.31) / DNAJB7 (22q13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNAJB7   24986
Cards
Entrez_Gene (NCBI)DNAJB7  150353  DnaJ heat shock protein family (Hsp40) member B7
AliasesDJ5; HSC3
GeneCards (Weizmann)DNAJB7
Ensembl hg19 (Hinxton)ENSG00000172404 [Gene_View]  chr22:41255554-41258130 [Contig_View]  DNAJB7 [Vega]
Ensembl hg38 (Hinxton)ENSG00000172404 [Gene_View]  chr22:41255554-41258130 [Contig_View]  DNAJB7 [Vega]
ICGC DataPortalENSG00000172404
TCGA cBioPortalDNAJB7
AceView (NCBI)DNAJB7
Genatlas (Paris)DNAJB7
WikiGenes150353
SOURCE (Princeton)DNAJB7
Genomic and cartography
GoldenPath hg19 (UCSC)DNAJB7  -     chr22:41255554-41258130 -  22q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DNAJB7  -     22q13.2   [Description]    (hg38-Dec_2013)
EnsemblDNAJB7 - 22q13.2 [CytoView hg19]  DNAJB7 - 22q13.2 [CytoView hg38]
Mapping of homologs : NCBIDNAJB7 [Mapview hg19]  DNAJB7 [Mapview hg38]
OMIM611336   
Gene and transcription
Genbank (Entrez)AF085232 BC112135 CR456468 CU013018 CU013306
RefSeq transcript (Entrez)NM_145174
RefSeq genomic (Entrez)NC_000022 NC_018933 NG_028221 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)DNAJB7
Cluster EST : UnigeneHs.585042 [ NCBI ]
CGAP (NCI)Hs.585042
Alternative Splicing GalleryENSG00000172404
Gene ExpressionDNAJB7 [ NCBI-GEO ]   DNAJB7 [ EBI - ARRAY_EXPRESS ]   DNAJB7 [ SEEK ]   DNAJB7 [ MEM ]
Gene Expression Viewer (FireBrowse)DNAJB7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)150353
GTEX Portal (Tissue expression)DNAJB7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z6W7 (Uniprot)
NextProtQ7Z6W7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z6W7
Splice isoforms : SwissVarQ7Z6W7 (Swissvar)
PhosPhoSitePlusQ7Z6W7
Domaine pattern : Prosite (Expaxy)DNAJ_1 (PS00636)    DNAJ_2 (PS50076)   
Domains : Interpro (EBI)DnaJ_domain    DnaJ_domain_CS   
Domain families : Pfam (Sanger)DnaJ (PF00226)   
Domain families : Pfam (NCBI)pfam00226   
Domain families : Smart (EMBL)DnaJ (SM00271)  
DMDM Disease mutations150353
Blocks (Seattle)DNAJB7
SuperfamilyQ7Z6W7
Human Protein AtlasENSG00000172404
Peptide AtlasQ7Z6W7
HPRD07010
IPIIPI00103726   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z6W7
IntAct (EBI)Q7Z6W7
FunCoupENSG00000172404
BioGRIDDNAJB7
STRING (EMBL)DNAJB7
ZODIACDNAJB7
Ontologies - Pathways
QuickGOQ7Z6W7
Ontology : AmiGOchaperone binding  
Ontology : EGO-EBIchaperone binding  
NDEx Network
Atlas of Cancer Signalling NetworkDNAJB7
Wikipedia pathwaysDNAJB7
Orthology - Evolution
OrthoDB150353
GeneTree (enSembl)ENSG00000172404
Phylogenetic Trees/Animal Genes : TreeFamDNAJB7
Homologs : HomoloGeneDNAJB7
Homology/Alignments : Family Browser (UCSC)DNAJB7
Gene fusions - Rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerDNAJB7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNAJB7
dbVarDNAJB7
ClinVarDNAJB7
1000_GenomesDNAJB7 
Exome Variant ServerDNAJB7
ExAC (Exome Aggregation Consortium)DNAJB7 (select the gene name)
Genetic variants : HAPMAP150353
Genomic Variants (DGV)DNAJB7 [DGVbeta]
Mutations
ICGC Data PortalDNAJB7 
TCGA Data PortalDNAJB7 
Broad Tumor PortalDNAJB7
OASIS PortalDNAJB7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNAJB7 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DNAJB7
DgiDB (Drug Gene Interaction Database)DNAJB7
DoCM (Curated mutations)DNAJB7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNAJB7 (select a term)
intoGenDNAJB7
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)22:41255554-41258130  ENSG00000172404
CONAN: Copy Number AnalysisDNAJB7 
Mutations and Diseases : HGMDDNAJB7
OMIM611336   
MedgenDNAJB7
Genetic Testing Registry DNAJB7
NextProtQ7Z6W7 [Medical]
TSGene150353
GENETestsDNAJB7
Huge Navigator DNAJB7 [HugePedia]
snp3D : Map Gene to Disease150353
BioCentury BCIQDNAJB7
ClinGenDNAJB7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD150353
Chemical/Pharm GKB GenePA134961522
Clinical trialDNAJB7
Miscellaneous
canSAR (ICR)DNAJB7 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNAJB7
EVEXDNAJB7
GoPubMedDNAJB7
iHOPDNAJB7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat May 28 11:00:34 CEST 2016

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