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DNAJC12 (DnaJ (Hsp40) homolog, subfamily C, member 12)

Identity

Other namesJDP1
HGNC (Hugo) DNAJC12
LocusID (NCBI) 56521
Location 10q21.3
Location_base_pair Starts at 69556427 and ends at 69597937 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)DNAJC12   28908
Entrez_Gene (NCBI)DNAJC12  56521  DnaJ (Hsp40) homolog, subfamily C, member 12
Cards
GeneCards (Weizmann)DNAJC12
Ensembl (Hinxton)ENSG00000108176 [Gene_View]  chr10:69556427-69597937 [Contig_View]  DNAJC12 [Vega]
AceView (NCBI)DNAJC12
Genatlas (Paris)DNAJC12
SOURCE (Stanford)NM_021800 NM_201262
Genomic and cartography
GoldenPath (UCSC)DNAJC12  -  10q21.3   chr10:69556427-69597937 -  10q21.3   [Description]    (hg19-Feb_2009)
EnsemblDNAJC12 - 10q21.3 [CytoView]
Mapping of homologs : NCBIDNAJC12 [Mapview]
OMIM606060   
Gene and transcription
Genbank (Entrez)AF176012 AF176013 AK289537 BC017018 CB121724
RefSeq transcript (SRS)NM_021800 NM_201262
RefSeq transcript (Entrez)NM_021800 NM_201262
RefSeq genomic (SRS)AC_000142 NC_000010 NC_018921 NT_030059 NW_001837986 NW_004078068
RefSeq genomic (Entrez)AC_000142 NC_000010 NC_018921 NT_030059 NW_001837986 NW_004078068
Consensus coding sequences : CCDS (NCBI)DNAJC12
Cluster EST : UnigeneHs.260720 [ SRS ] Hs.260720 [ NCBI ]
CGAP (NCI)Hs.260720
Alternative Splicing : Fast-db (Paris)GSHG0004121
Alternative Splicing GalleryENSG00000108176
Gene ExpressionDNAJC12 [ NCBI-GEO ]   DNAJC12 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UKB3 (SRS) Q9UKB3 (Uniprot)
NextProtQ9UKB3
With graphics : InterProQ9UKB3
Splice isoforms : SwissVarQ9UKB3(Swissvar)
Domaine pattern : Prosite (SRS)DNAJ_1 (PS00636)    DNAJ_2 (PS50076)   
Domaine pattern : Prosite (Expaxy)DNAJ_1 (PS00636)    DNAJ_2 (PS50076)   
Domains : Interpro (SRS)DnaJ_N    Hsp_DnaJ   
Domains : Interpro (EBI)DnaJ_N    Hsp_DnaJ   
Related proteins : CluSTrQ9UKB3
Domain families : Pfam (SRS)DnaJ (PF00226)   
Domain families : Pfam (Sanger)DnaJ (PF00226)   
Domain families : Pfam (NCBI)pfam00226   
Domain families : Smart (EMBL)DnaJ (SM00271)  
DMDM56521
Blocks (Seattle)Q9UKB3
PDB (SRS)2CTQ   
PDB (PDBSum)2CTQ   
PDB (IMB)2CTQ   
PDB (RSDB)2CTQ   
Human Protein AtlasENSG00000108176
HPRD06930
IPIIPI00029149   IPI00220169   
Protein Interaction databases
DIP (DOE-UCLA)Q9UKB3
IntAct (EBI)Q9UKB3
FunCoupENSG00000108176
REACTOMEDNAJC12
Protein Interaction Database56521
BioGRIDDNAJC12
InParanoidQ9UKB3
Interologous Interaction database Q9UKB3
IntegromeDBDNAJC12
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)DNAJC12
SNP (GeneSNP Utah)DNAJC12
SNP : HGBaseDNAJC12
Genetic variants : HAPMAPDNAJC12
Somatic Mutations in Cancer : COSMICDNAJC12 
CONAN: Copy Number AnalysisDNAJC12 
Mutations and Diseases : HGMDDNAJC12
OMIM606060   
GENETests606060   
Disease Genetic AssociationDNAJC12
Huge Navigator DNAJC12 [HugePedia]  DNAJC12 [HugeCancerGEM]
Genomic VariantsDNAJC12  DNAJC12 [DGVbeta]
snp3D : Map Gene to Disease56521
General knowledge
Homologs : HomoloGeneDNAJC12
Homology/Alignments : Family Browser (UCSC)DNAJC12
Phylogenetic Trees/Animal Genes : TreeFamDNAJC12
Chemical/Protein Interactions : CTD56521
Chemical/Pharm GKB GenePA134931354
Clinical trialDNAJC12
Cancer Resource (Charite)ENSG00000108176
Ontology : AmiGOprotein folding  heat shock protein binding  unfolded protein binding  
Ontology : EGO-EBIprotein folding  heat shock protein binding  unfolded protein binding  
Other databases
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
PubGeneDNAJC12
iHOPDNAJC12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:45:43 CEST 2013
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