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DNAJC15 (DnaJ heat shock protein family (Hsp40) member C15)

Identity

Alias_namesDNAJD1
DnaJ (Hsp40) homolog, subfamily D, member 1
DnaJ (Hsp40) homolog, subfamily C, member 15
Alias_symbol (synonym)MCJ
Other aliasHSD18
HGNC (Hugo) DNAJC15
LocusID (NCBI) 29103
Atlas_Id 43753
Location 13q14.11  [Link to chromosome band 13q14]
Location_base_pair Starts at 43597362 and ends at 43683306 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
DNAJC15 (13q14.11) / DDX39A (19p13.12)DNAJC15 (13q14.11) / DES (2q35)DNAJC15 (13q14.11) / MAX (14q23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNAJC15   20325
Cards
Entrez_Gene (NCBI)DNAJC15  29103  DnaJ heat shock protein family (Hsp40) member C15
AliasesDNAJD1; HSD18; MCJ
GeneCards (Weizmann)DNAJC15
Ensembl hg19 (Hinxton)ENSG00000120675 [Gene_View]  chr13:43597362-43683306 [Contig_View]  DNAJC15 [Vega]
Ensembl hg38 (Hinxton)ENSG00000120675 [Gene_View]  chr13:43597362-43683306 [Contig_View]  DNAJC15 [Vega]
ICGC DataPortalENSG00000120675
TCGA cBioPortalDNAJC15
AceView (NCBI)DNAJC15
Genatlas (Paris)DNAJC15
WikiGenes29103
SOURCE (Princeton)DNAJC15
Genetics Home Reference (NIH)DNAJC15
Genomic and cartography
GoldenPath hg19 (UCSC)DNAJC15  -     chr13:43597362-43683306 +  13q14.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DNAJC15  -     13q14.11   [Description]    (hg38-Dec_2013)
EnsemblDNAJC15 - 13q14.11 [CytoView hg19]  DNAJC15 - 13q14.11 [CytoView hg38]
Mapping of homologs : NCBIDNAJC15 [Mapview hg19]  DNAJC15 [Mapview hg38]
OMIM615339   
Gene and transcription
Genbank (Entrez)AF126743 AJ270691 AK311866 AY248898 AY512565
RefSeq transcript (Entrez)NM_013238
RefSeq genomic (Entrez)NC_000013 NC_018924 NT_024524 NW_004929388
Consensus coding sequences : CCDS (NCBI)DNAJC15
Cluster EST : UnigeneHs.438830 [ NCBI ]
CGAP (NCI)Hs.438830
Alternative Splicing GalleryENSG00000120675
Gene ExpressionDNAJC15 [ NCBI-GEO ]   DNAJC15 [ EBI - ARRAY_EXPRESS ]   DNAJC15 [ SEEK ]   DNAJC15 [ MEM ]
Gene Expression Viewer (FireBrowse)DNAJC15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)29103
GTEX Portal (Tissue expression)DNAJC15
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y5T4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y5T4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y5T4
Splice isoforms : SwissVarQ9Y5T4
PhosPhoSitePlusQ9Y5T4
Domaine pattern : Prosite (Expaxy)DNAJ_2 (PS50076)   
Domains : Interpro (EBI)DnaJ_domain   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)DnaJ (SM00271)  
Conserved Domain (NCBI)DNAJC15
DMDM Disease mutations29103
Blocks (Seattle)DNAJC15
SuperfamilyQ9Y5T4
Human Protein AtlasENSG00000120675
Peptide AtlasQ9Y5T4
HPRD13238
IPIIPI00001649   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y5T4
IntAct (EBI)Q9Y5T4
FunCoupENSG00000120675
BioGRIDDNAJC15
STRING (EMBL)DNAJC15
ZODIACDNAJC15
Ontologies - Pathways
QuickGOQ9Y5T4
Ontology : AmiGOprotein binding  mitochondrial inner membrane  cellular response to starvation  protein transport  integral component of membrane  regulation of lipid metabolic process  negative regulation of protein complex assembly  negative regulation of mitochondrial electron transport, NADH to ubiquinone  
Ontology : EGO-EBIprotein binding  mitochondrial inner membrane  cellular response to starvation  protein transport  integral component of membrane  regulation of lipid metabolic process  negative regulation of protein complex assembly  negative regulation of mitochondrial electron transport, NADH to ubiquinone  
NDEx NetworkDNAJC15
Atlas of Cancer Signalling NetworkDNAJC15
Wikipedia pathwaysDNAJC15
Orthology - Evolution
OrthoDB29103
GeneTree (enSembl)ENSG00000120675
Phylogenetic Trees/Animal Genes : TreeFamDNAJC15
HOVERGENQ9Y5T4
HOGENOMQ9Y5T4
Homologs : HomoloGeneDNAJC15
Homology/Alignments : Family Browser (UCSC)DNAJC15
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNAJC15 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNAJC15
dbVarDNAJC15
ClinVarDNAJC15
1000_GenomesDNAJC15 
Exome Variant ServerDNAJC15
ExAC (Exome Aggregation Consortium)DNAJC15 (select the gene name)
Genetic variants : HAPMAP29103
Genomic Variants (DGV)DNAJC15 [DGVbeta]
DECIPHER (Syndromes)13:43597362-43683306  ENSG00000120675
CONAN: Copy Number AnalysisDNAJC15 
Mutations
ICGC Data PortalDNAJC15 
TCGA Data PortalDNAJC15 
Broad Tumor PortalDNAJC15
OASIS PortalDNAJC15 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNAJC15  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDNAJC15
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch DNAJC15
DgiDB (Drug Gene Interaction Database)DNAJC15
DoCM (Curated mutations)DNAJC15 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNAJC15 (select a term)
intoGenDNAJC15
Cancer3DDNAJC15(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615339   
Orphanet
MedgenDNAJC15
Genetic Testing Registry DNAJC15
NextProtQ9Y5T4 [Medical]
TSGene29103
GENETestsDNAJC15
Huge Navigator DNAJC15 [HugePedia]
snp3D : Map Gene to Disease29103
BioCentury BCIQDNAJC15
ClinGenDNAJC15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD29103
Chemical/Pharm GKB GenePA134932264
Clinical trialDNAJC15
Miscellaneous
canSAR (ICR)DNAJC15 (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNAJC15
EVEXDNAJC15
GoPubMedDNAJC15
iHOPDNAJC15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 14:59:08 CEST 2017

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