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DNAJC19 (DnaJ heat shock protein family (Hsp40) member C19)

Identity

Alias_namesDnaJ (Hsp40) homolog
Alias_symbol (synonym)TIMM14
Tim14
Pam18
Other aliasPAM18
TIM14
HGNC (Hugo) DNAJC19
LocusID (NCBI) 131118
Atlas_Id 47207
Location 3q26.33  [Link to chromosome band 3q26]
Location_base_pair Starts at 180701498 and ends at 180707306 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
DNAJC19 (3q26.33) / ADK (10q22.2)DNAJC19 3q26.33 / ADK 10q22.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNAJC19   30528
LRG (Locus Reference Genomic)LRG_743
Cards
Entrez_Gene (NCBI)DNAJC19  131118  DnaJ heat shock protein family (Hsp40) member C19
AliasesPAM18; TIM14; TIMM14
GeneCards (Weizmann)DNAJC19
Ensembl hg19 (Hinxton)ENSG00000205981 [Gene_View]  chr3:180701498-180707306 [Contig_View]  DNAJC19 [Vega]
Ensembl hg38 (Hinxton)ENSG00000205981 [Gene_View]  chr3:180701498-180707306 [Contig_View]  DNAJC19 [Vega]
ICGC DataPortalENSG00000205981
TCGA cBioPortalDNAJC19
AceView (NCBI)DNAJC19
Genatlas (Paris)DNAJC19
WikiGenes131118
SOURCE (Princeton)DNAJC19
Genetics Home Reference (NIH)DNAJC19
Genomic and cartography
GoldenPath hg19 (UCSC)DNAJC19  -     chr3:180701498-180707306 -  3q26.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DNAJC19  -     3q26.33   [Description]    (hg38-Dec_2013)
EnsemblDNAJC19 - 3q26.33 [CytoView hg19]  DNAJC19 - 3q26.33 [CytoView hg38]
Mapping of homologs : NCBIDNAJC19 [Mapview hg19]  DNAJC19 [Mapview hg38]
OMIM608977   610198   
Gene and transcription
Genbank (Entrez)AA775489 AI268262 AK307097 AK309019 AK311765
RefSeq transcript (Entrez)NM_001190233 NM_145261 NM_201259 NM_201260 NM_201261
RefSeq genomic (Entrez)NC_000003 NC_018914 NG_022933 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)DNAJC19
Cluster EST : UnigeneHs.230601 [ NCBI ]
CGAP (NCI)Hs.230601
Alternative Splicing GalleryENSG00000205981
Gene ExpressionDNAJC19 [ NCBI-GEO ]   DNAJC19 [ EBI - ARRAY_EXPRESS ]   DNAJC19 [ SEEK ]   DNAJC19 [ MEM ]
Gene Expression Viewer (FireBrowse)DNAJC19 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)131118
GTEX Portal (Tissue expression)DNAJC19
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96DA6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96DA6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96DA6
Splice isoforms : SwissVarQ96DA6
PhosPhoSitePlusQ96DA6
Domaine pattern : Prosite (Expaxy)DNAJ_2 (PS50076)   
Domains : Interpro (EBI)DnaJ_domain   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)DnaJ (SM00271)  
Conserved Domain (NCBI)DNAJC19
DMDM Disease mutations131118
Blocks (Seattle)DNAJC19
SuperfamilyQ96DA6
Human Protein AtlasENSG00000205981
Peptide AtlasQ96DA6
HPRD12349
IPIIPI00304306   IPI00795893   IPI00397464   IPI00795263   
Protein Interaction databases
DIP (DOE-UCLA)Q96DA6
IntAct (EBI)Q96DA6
FunCoupENSG00000205981
BioGRIDDNAJC19
STRING (EMBL)DNAJC19
ZODIACDNAJC19
Ontologies - Pathways
QuickGOQ96DA6
Ontology : AmiGOprotein binding  mitochondrion  mitochondrial inner membrane  protein folding  protein targeting to mitochondrion  visual perception  integral component of membrane  protein complex  genitalia development  
Ontology : EGO-EBIprotein binding  mitochondrion  mitochondrial inner membrane  protein folding  protein targeting to mitochondrion  visual perception  integral component of membrane  protein complex  genitalia development  
NDEx NetworkDNAJC19
Atlas of Cancer Signalling NetworkDNAJC19
Wikipedia pathwaysDNAJC19
Orthology - Evolution
OrthoDB131118
GeneTree (enSembl)ENSG00000205981
Phylogenetic Trees/Animal Genes : TreeFamDNAJC19
HOVERGENQ96DA6
HOGENOMQ96DA6
Homologs : HomoloGeneDNAJC19
Homology/Alignments : Family Browser (UCSC)DNAJC19
Gene fusions - Rearrangements
Fusion : MitelmanDNAJC19/ADK [3q26.33/10q22.2]  
Fusion: TCGADNAJC19 3q26.33 ADK 10q22.2 HNSC
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNAJC19 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNAJC19
dbVarDNAJC19
ClinVarDNAJC19
1000_GenomesDNAJC19 
Exome Variant ServerDNAJC19
ExAC (Exome Aggregation Consortium)DNAJC19 (select the gene name)
Genetic variants : HAPMAP131118
Genomic Variants (DGV)DNAJC19 [DGVbeta]
DECIPHER (Syndromes)3:180701498-180707306  ENSG00000205981
CONAN: Copy Number AnalysisDNAJC19 
Mutations
ICGC Data PortalDNAJC19 
TCGA Data PortalDNAJC19 
Broad Tumor PortalDNAJC19
OASIS PortalDNAJC19 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNAJC19  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDNAJC19
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch DNAJC19
DgiDB (Drug Gene Interaction Database)DNAJC19
DoCM (Curated mutations)DNAJC19 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNAJC19 (select a term)
intoGenDNAJC19
Cancer3DDNAJC19(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608977    610198   
Orphanet10892   
MedgenDNAJC19
Genetic Testing Registry DNAJC19
NextProtQ96DA6 [Medical]
TSGene131118
GENETestsDNAJC19
Huge Navigator DNAJC19 [HugePedia]
snp3D : Map Gene to Disease131118
BioCentury BCIQDNAJC19
ClinGenDNAJC19
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD131118
Chemical/Pharm GKB GenePA142671967
Clinical trialDNAJC19
Miscellaneous
canSAR (ICR)DNAJC19 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNAJC19
EVEXDNAJC19
GoPubMedDNAJC19
iHOPDNAJC19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 14:59:08 CEST 2017

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