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DNAJC22 (DnaJ heat shock protein family (Hsp40) member C22)

Identity

Alias_namesDnaJ (Hsp40) homolog
Alias_symbol (synonym)wus
FLJ13236
Other alias
HGNC (Hugo) DNAJC22
LocusID (NCBI) 79962
Atlas_Id 47244
Location 12q13.12  [Link to chromosome band 12q13]
Location_base_pair Starts at 49346917 and ends at 49353684 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DNAJC22 (12q13.12) / DNAJC22 (12q13.12)DNAJC22 (12q13.12) / NTN4 (12q22)MUC16 (19p13.2) / DNAJC22 (12q13.12)
DNAJC22 12q13.12 / NTN4 12q22

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNAJC22   25802
Cards
Entrez_Gene (NCBI)DNAJC22  79962  DnaJ heat shock protein family (Hsp40) member C22
Aliaseswus
GeneCards (Weizmann)DNAJC22
Ensembl hg19 (Hinxton)ENSG00000178401 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178401 [Gene_View]  chr12:49346917-49353684 [Contig_View]  DNAJC22 [Vega]
ICGC DataPortalENSG00000178401
TCGA cBioPortalDNAJC22
AceView (NCBI)DNAJC22
Genatlas (Paris)DNAJC22
WikiGenes79962
SOURCE (Princeton)DNAJC22
Genetics Home Reference (NIH)DNAJC22
Genomic and cartography
GoldenPath hg38 (UCSC)DNAJC22  -     chr12:49346917-49353684 +  12q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNAJC22  -     12q13.12   [Description]    (hg19-Feb_2009)
EnsemblDNAJC22 - 12q13.12 [CytoView hg19]  DNAJC22 - 12q13.12 [CytoView hg38]
Mapping of homologs : NCBIDNAJC22 [Mapview hg19]  DNAJC22 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055747 BC033236
RefSeq transcript (Entrez)NM_001304944 NM_024902
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DNAJC22
Cluster EST : UnigeneHs.659300 [ NCBI ]
CGAP (NCI)Hs.659300
Alternative Splicing GalleryENSG00000178401
Gene ExpressionDNAJC22 [ NCBI-GEO ]   DNAJC22 [ EBI - ARRAY_EXPRESS ]   DNAJC22 [ SEEK ]   DNAJC22 [ MEM ]
Gene Expression Viewer (FireBrowse)DNAJC22 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79962
GTEX Portal (Tissue expression)DNAJC22
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N4W6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N4W6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N4W6
Splice isoforms : SwissVarQ8N4W6
PhosPhoSitePlusQ8N4W6
Domaine pattern : Prosite (Expaxy)DNAJ_2 (PS50076)   
Domains : Interpro (EBI)DnaJ_domain    TM2   
Domain families : Pfam (Sanger)DnaJ (PF00226)    TM2 (PF05154)   
Domain families : Pfam (NCBI)pfam00226    pfam05154   
Domain families : Smart (EMBL)DnaJ (SM00271)  
Conserved Domain (NCBI)DNAJC22
DMDM Disease mutations79962
Blocks (Seattle)DNAJC22
SuperfamilyQ8N4W6
Human Protein AtlasENSG00000178401
Peptide AtlasQ8N4W6
HPRD08580
IPIIPI00166797   
Protein Interaction databases
DIP (DOE-UCLA)Q8N4W6
IntAct (EBI)Q8N4W6
FunCoupENSG00000178401
BioGRIDDNAJC22
STRING (EMBL)DNAJC22
ZODIACDNAJC22
Ontologies - Pathways
QuickGOQ8N4W6
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkDNAJC22
Atlas of Cancer Signalling NetworkDNAJC22
Wikipedia pathwaysDNAJC22
Orthology - Evolution
OrthoDB79962
GeneTree (enSembl)ENSG00000178401
Phylogenetic Trees/Animal Genes : TreeFamDNAJC22
HOVERGENQ8N4W6
HOGENOMQ8N4W6
Homologs : HomoloGeneDNAJC22
Homology/Alignments : Family Browser (UCSC)DNAJC22
Gene fusions - Rearrangements
Fusion : MitelmanDNAJC22/NTN4 [12q13.12/12q22]  
Fusion: TCGADNAJC22 12q13.12 NTN4 12q22 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNAJC22 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNAJC22
dbVarDNAJC22
ClinVarDNAJC22
1000_GenomesDNAJC22 
Exome Variant ServerDNAJC22
ExAC (Exome Aggregation Consortium)DNAJC22 (select the gene name)
Genetic variants : HAPMAP79962
Genomic Variants (DGV)DNAJC22 [DGVbeta]
DECIPHERDNAJC22 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNAJC22 
Mutations
ICGC Data PortalDNAJC22 
TCGA Data PortalDNAJC22 
Broad Tumor PortalDNAJC22
OASIS PortalDNAJC22 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNAJC22  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDNAJC22
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DNAJC22
DgiDB (Drug Gene Interaction Database)DNAJC22
DoCM (Curated mutations)DNAJC22 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNAJC22 (select a term)
intoGenDNAJC22
Cancer3DDNAJC22(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDNAJC22
Genetic Testing Registry DNAJC22
NextProtQ8N4W6 [Medical]
TSGene79962
GENETestsDNAJC22
Target ValidationDNAJC22
Huge Navigator DNAJC22 [HugePedia]
snp3D : Map Gene to Disease79962
BioCentury BCIQDNAJC22
ClinGenDNAJC22
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79962
Chemical/Pharm GKB GenePA162383905
Clinical trialDNAJC22
Miscellaneous
canSAR (ICR)DNAJC22 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNAJC22
EVEXDNAJC22
GoPubMedDNAJC22
iHOPDNAJC22
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:31:29 CEST 2017

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