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DNAJC24 (DnaJ heat shock protein family (Hsp40) member C24)

Identity

Alias_namesZCSL3
DPH4
zinc finger, CSL-type containing 3
DPH4 homolog (JJJ3, S. cerevisiae)
DPH4, JJJ3 homolog (S. cerevisiae)
DnaJ (Hsp40) homolog, subfamily C, member 24
Alias_symbol (synonym)JJJ3
Other alias
HGNC (Hugo) DNAJC24
LocusID (NCBI) 120526
Atlas_Id 62564
Location 11p13  [Link to chromosome band 11p13]
Location_base_pair Starts at 31369830 and ends at 31432835 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DNAJC24 (11p13) / IMMP1L (11p13)EIF5A (17p13.1) / DNAJC24 (11p13)ELP4 (11p13) / DNAJC24 (11p13)
RCN1 (11p13) / DNAJC24 (11p13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNAJC24   26979
Cards
Entrez_Gene (NCBI)DNAJC24  120526  DnaJ heat shock protein family (Hsp40) member C24
AliasesDPH4; JJJ3; ZCSL3
GeneCards (Weizmann)DNAJC24
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:31369830-31432835 [Contig_View]  DNAJC24 [Vega]
TCGA cBioPortalDNAJC24
AceView (NCBI)DNAJC24
Genatlas (Paris)DNAJC24
WikiGenes120526
SOURCE (Princeton)DNAJC24
Genetics Home Reference (NIH)DNAJC24
Genomic and cartography
GoldenPath hg38 (UCSC)DNAJC24  -     chr11:31369830-31432835 +  11p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNAJC24  -     11p13   [Description]    (hg19-Feb_2009)
EnsemblDNAJC24 - 11p13 [CytoView hg19]  DNAJC24 - 11p13 [CytoView hg38]
Mapping of homologs : NCBIDNAJC24 [Mapview hg19]  DNAJC24 [Mapview hg38]
OMIM611072   
Gene and transcription
Genbank (Entrez)AK123087 AK289665 AL050199 AL833128 BC036571
RefSeq transcript (Entrez)NM_181706
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DNAJC24
Cluster EST : UnigeneHs.741895 [ NCBI ]
CGAP (NCI)Hs.741895
Gene ExpressionDNAJC24 [ NCBI-GEO ]   DNAJC24 [ EBI - ARRAY_EXPRESS ]   DNAJC24 [ SEEK ]   DNAJC24 [ MEM ]
Gene Expression Viewer (FireBrowse)DNAJC24 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)120526
GTEX Portal (Tissue expression)DNAJC24
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6P3W2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6P3W2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6P3W2
Splice isoforms : SwissVarQ6P3W2
PhosPhoSitePlusQ6P3W2
Domaine pattern : Prosite (Expaxy)DNAJ_2 (PS50076)    ZF_DPH (PS51074)   
Domains : Interpro (EBI)DnaJ_domain    Znf_DHP   
Domain families : Pfam (Sanger)DnaJ (PF00226)    zf-CSL (PF05207)   
Domain families : Pfam (NCBI)pfam00226    pfam05207   
Domain families : Smart (EMBL)DnaJ (SM00271)  
Conserved Domain (NCBI)DNAJC24
DMDM Disease mutations120526
Blocks (Seattle)DNAJC24
PDB (SRS)2L6L   
PDB (PDBSum)2L6L   
PDB (IMB)2L6L   
PDB (RSDB)2L6L   
Structural Biology KnowledgeBase2L6L   
SCOP (Structural Classification of Proteins)2L6L   
CATH (Classification of proteins structures)2L6L   
SuperfamilyQ6P3W2
Peptide AtlasQ6P3W2
HPRD15705
IPIIPI00055046   IPI00984814   IPI00977750   IPI00975831   IPI00976578   IPI00983656   
Protein Interaction databases
DIP (DOE-UCLA)Q6P3W2
IntAct (EBI)Q6P3W2
BioGRIDDNAJC24
STRING (EMBL)DNAJC24
ZODIACDNAJC24
Ontologies - Pathways
QuickGOQ6P3W2
Ontology : AmiGOATPase activator activity  cytoplasm  cytoskeleton  ferrous iron binding  zinc ion binding  peptidyl-diphthamide biosynthetic process from peptidyl-histidine  positive regulation of ATPase activity  oxidation-reduction process  chaperone-mediated protein folding  
Ontology : EGO-EBIATPase activator activity  cytoplasm  cytoskeleton  ferrous iron binding  zinc ion binding  peptidyl-diphthamide biosynthetic process from peptidyl-histidine  positive regulation of ATPase activity  oxidation-reduction process  chaperone-mediated protein folding  
NDEx NetworkDNAJC24
Atlas of Cancer Signalling NetworkDNAJC24
Wikipedia pathwaysDNAJC24
Orthology - Evolution
OrthoDB120526
Phylogenetic Trees/Animal Genes : TreeFamDNAJC24
HOVERGENQ6P3W2
HOGENOMQ6P3W2
Homologs : HomoloGeneDNAJC24
Homology/Alignments : Family Browser (UCSC)DNAJC24
Gene fusions - Rearrangements
Tumor Fusion PortalDNAJC24
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNAJC24 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNAJC24
dbVarDNAJC24
ClinVarDNAJC24
1000_GenomesDNAJC24 
Exome Variant ServerDNAJC24
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP120526
Genomic Variants (DGV)DNAJC24 [DGVbeta]
DECIPHERDNAJC24 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNAJC24 
Mutations
ICGC Data PortalDNAJC24 
TCGA Data PortalDNAJC24 
Broad Tumor PortalDNAJC24
OASIS PortalDNAJC24 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNAJC24  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDNAJC24
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DNAJC24
DgiDB (Drug Gene Interaction Database)DNAJC24
DoCM (Curated mutations)DNAJC24 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNAJC24 (select a term)
intoGenDNAJC24
Cancer3DDNAJC24(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611072   
Orphanet
DisGeNETDNAJC24
MedgenDNAJC24
Genetic Testing Registry DNAJC24
NextProtQ6P3W2 [Medical]
TSGene120526
GENETestsDNAJC24
Target ValidationDNAJC24
Huge Navigator DNAJC24 [HugePedia]
snp3D : Map Gene to Disease120526
BioCentury BCIQDNAJC24
ClinGenDNAJC24
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD120526
Chemical/Pharm GKB GenePA162383906
Clinical trialDNAJC24
Miscellaneous
canSAR (ICR)DNAJC24 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNAJC24
EVEXDNAJC24
GoPubMedDNAJC24
iHOPDNAJC24
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:23:19 CET 2017

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