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DNAJC25 (DnaJ heat shock protein family (Hsp40) member C25)

Identity

Alias_namesDnaJ (Hsp40) homolog, subfamily C , member 25
Alias_symbol (synonym)bA16L21.2.1
Other alias
HGNC (Hugo) DNAJC25
LocusID (NCBI) 548645
Atlas_Id 62565
Location 9q31.3  [Link to chromosome band 9q31]
Location_base_pair Starts at 111631352 and ends at 111654351 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DNAJC25 (9q31.3) / GNG10 (9q31.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNAJC25   34187
Cards
Entrez_Gene (NCBI)DNAJC25  548645  DnaJ heat shock protein family (Hsp40) member C25
AliasesbA16L21.2.1
GeneCards (Weizmann)DNAJC25
Ensembl hg19 (Hinxton)ENSG00000059769 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000059769 [Gene_View]  chr9:111631352-111654351 [Contig_View]  DNAJC25 [Vega]
ICGC DataPortalENSG00000059769
TCGA cBioPortalDNAJC25
AceView (NCBI)DNAJC25
Genatlas (Paris)DNAJC25
WikiGenes548645
SOURCE (Princeton)DNAJC25
Genetics Home Reference (NIH)DNAJC25
Genomic and cartography
GoldenPath hg38 (UCSC)DNAJC25  -     chr9:111631352-111654351 +  9q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNAJC25  -     9q31.3   [Description]    (hg19-Feb_2009)
EnsemblDNAJC25 - 9q31.3 [CytoView hg19]  DNAJC25 - 9q31.3 [CytoView hg38]
Mapping of homologs : NCBIDNAJC25 [Mapview hg19]  DNAJC25 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF447177 AK095452 AW629467 BC048318 DR004317
RefSeq transcript (Entrez)NM_001015882
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DNAJC25
Cluster EST : UnigeneHs.534196 [ NCBI ]
CGAP (NCI)Hs.534196
Alternative Splicing GalleryENSG00000059769
Gene ExpressionDNAJC25 [ NCBI-GEO ]   DNAJC25 [ EBI - ARRAY_EXPRESS ]   DNAJC25 [ SEEK ]   DNAJC25 [ MEM ]
Gene Expression Viewer (FireBrowse)DNAJC25 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)548645
GTEX Portal (Tissue expression)DNAJC25
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H1X3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H1X3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H1X3
Splice isoforms : SwissVarQ9H1X3
PhosPhoSitePlusQ9H1X3
Domaine pattern : Prosite (Expaxy)DNAJ_2 (PS50076)   
Domains : Interpro (EBI)DnaJ_domain   
Domain families : Pfam (Sanger)DnaJ (PF00226)   
Domain families : Pfam (NCBI)pfam00226   
Domain families : Smart (EMBL)DnaJ (SM00271)  
Conserved Domain (NCBI)DNAJC25
DMDM Disease mutations548645
Blocks (Seattle)DNAJC25
SuperfamilyQ9H1X3
Human Protein AtlasENSG00000059769
Peptide AtlasQ9H1X3
HPRD18685
IPIIPI00303297   
Protein Interaction databases
DIP (DOE-UCLA)Q9H1X3
IntAct (EBI)Q9H1X3
FunCoupENSG00000059769
BioGRIDDNAJC25
STRING (EMBL)DNAJC25
ZODIACDNAJC25
Ontologies - Pathways
QuickGOQ9H1X3
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkDNAJC25
Atlas of Cancer Signalling NetworkDNAJC25
Wikipedia pathwaysDNAJC25
Orthology - Evolution
OrthoDB548645
GeneTree (enSembl)ENSG00000059769
Phylogenetic Trees/Animal Genes : TreeFamDNAJC25
HOVERGENQ9H1X3
HOGENOMQ9H1X3
Homologs : HomoloGeneDNAJC25
Homology/Alignments : Family Browser (UCSC)DNAJC25
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNAJC25 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNAJC25
dbVarDNAJC25
ClinVarDNAJC25
1000_GenomesDNAJC25 
Exome Variant ServerDNAJC25
ExAC (Exome Aggregation Consortium)DNAJC25 (select the gene name)
Genetic variants : HAPMAP548645
Genomic Variants (DGV)DNAJC25 [DGVbeta]
DECIPHERDNAJC25 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNAJC25 
Mutations
ICGC Data PortalDNAJC25 
TCGA Data PortalDNAJC25 
Broad Tumor PortalDNAJC25
OASIS PortalDNAJC25 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNAJC25  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDNAJC25
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DNAJC25
DgiDB (Drug Gene Interaction Database)DNAJC25
DoCM (Curated mutations)DNAJC25 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNAJC25 (select a term)
intoGenDNAJC25
Cancer3DDNAJC25(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDNAJC25
Genetic Testing Registry DNAJC25
NextProtQ9H1X3 [Medical]
TSGene548645
GENETestsDNAJC25
Target ValidationDNAJC25
Huge Navigator DNAJC25 [HugePedia]
snp3D : Map Gene to Disease548645
BioCentury BCIQDNAJC25
ClinGenDNAJC25
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD548645
Chemical/Pharm GKB GenePA162383921
Clinical trialDNAJC25
Miscellaneous
canSAR (ICR)DNAJC25 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNAJC25
EVEXDNAJC25
GoPubMedDNAJC25
iHOPDNAJC25
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:46:12 CEST 2017

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