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DNAJC5G (DnaJ heat shock protein family (Hsp40) member C5 gamma)

Identity

Alias_namesDnaJ (Hsp40) homolog
Alias_symbol (synonym)FLJ40417
CSP-gamma
Other alias
HGNC (Hugo) DNAJC5G
LocusID (NCBI) 285126
Atlas_Id 47151
Location 2p23.3  [Link to chromosome band 2p23]
Location_base_pair Starts at 27275421 and ends at 27281431 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNAJC5G   24844
Cards
Entrez_Gene (NCBI)DNAJC5G  285126  DnaJ heat shock protein family (Hsp40) member C5 gamma
AliasesCSP-gamma
GeneCards (Weizmann)DNAJC5G
Ensembl hg19 (Hinxton)ENSG00000163793 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163793 [Gene_View]  ENSG00000163793 [Sequence]  chr2:27275421-27281431 [Contig_View]  DNAJC5G [Vega]
ICGC DataPortalENSG00000163793
TCGA cBioPortalDNAJC5G
AceView (NCBI)DNAJC5G
Genatlas (Paris)DNAJC5G
WikiGenes285126
SOURCE (Princeton)DNAJC5G
Genetics Home Reference (NIH)DNAJC5G
Genomic and cartography
GoldenPath hg38 (UCSC)DNAJC5G  -     chr2:27275421-27281431 +  2p23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNAJC5G  -     2p23.3   [Description]    (hg19-Feb_2009)
EnsemblDNAJC5G - 2p23.3 [CytoView hg19]  DNAJC5G - 2p23.3 [CytoView hg38]
Mapping of homologs : NCBIDNAJC5G [Mapview hg19]  DNAJC5G [Mapview hg38]
OMIM613946   
Gene and transcription
Genbank (Entrez)AF368277 AI183575 AK097736 AK302239 AK311597
RefSeq transcript (Entrez)NM_001303127 NM_001303128 NM_173650
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DNAJC5G
Cluster EST : UnigeneHs.709163 [ NCBI ]
CGAP (NCI)Hs.709163
Alternative Splicing GalleryENSG00000163793
Gene ExpressionDNAJC5G [ NCBI-GEO ]   DNAJC5G [ EBI - ARRAY_EXPRESS ]   DNAJC5G [ SEEK ]   DNAJC5G [ MEM ]
Gene Expression Viewer (FireBrowse)DNAJC5G [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)285126
GTEX Portal (Tissue expression)DNAJC5G
Human Protein AtlasENSG00000163793-DNAJC5G [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N7S2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N7S2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N7S2
Splice isoforms : SwissVarQ8N7S2
PhosPhoSitePlusQ8N7S2
Domaine pattern : Prosite (Expaxy)DNAJ_1 (PS00636)    DNAJ_2 (PS50076)   
Domains : Interpro (EBI)DnaJ_domain    DnaJ_domain_CS   
Domain families : Pfam (Sanger)DnaJ (PF00226)   
Domain families : Pfam (NCBI)pfam00226   
Domain families : Smart (EMBL)DnaJ (SM00271)  
Conserved Domain (NCBI)DNAJC5G
DMDM Disease mutations285126
Blocks (Seattle)DNAJC5G
SuperfamilyQ8N7S2
Human Protein Atlas [tissue]ENSG00000163793-DNAJC5G [tissue]
Peptide AtlasQ8N7S2
HPRD07108
IPIIPI00175217   IPI00894146   IPI00894527   IPI00892726   
Protein Interaction databases
DIP (DOE-UCLA)Q8N7S2
IntAct (EBI)Q8N7S2
FunCoupENSG00000163793
BioGRIDDNAJC5G
STRING (EMBL)DNAJC5G
ZODIACDNAJC5G
Ontologies - Pathways
QuickGOQ8N7S2
Ontology : AmiGOmembrane  
Ontology : EGO-EBImembrane  
NDEx NetworkDNAJC5G
Atlas of Cancer Signalling NetworkDNAJC5G
Wikipedia pathwaysDNAJC5G
Orthology - Evolution
OrthoDB285126
GeneTree (enSembl)ENSG00000163793
Phylogenetic Trees/Animal Genes : TreeFamDNAJC5G
HOVERGENQ8N7S2
HOGENOMQ8N7S2
Homologs : HomoloGeneDNAJC5G
Homology/Alignments : Family Browser (UCSC)DNAJC5G
Gene fusions - Rearrangements
Fusion : QuiverDNAJC5G
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNAJC5G [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNAJC5G
dbVarDNAJC5G
ClinVarDNAJC5G
1000_GenomesDNAJC5G 
Exome Variant ServerDNAJC5G
ExAC (Exome Aggregation Consortium)ENSG00000163793
GNOMAD BrowserENSG00000163793
Genetic variants : HAPMAP285126
Genomic Variants (DGV)DNAJC5G [DGVbeta]
DECIPHERDNAJC5G [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNAJC5G 
Mutations
ICGC Data PortalDNAJC5G 
TCGA Data PortalDNAJC5G 
Broad Tumor PortalDNAJC5G
OASIS PortalDNAJC5G [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNAJC5G  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDNAJC5G
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DNAJC5G
DgiDB (Drug Gene Interaction Database)DNAJC5G
DoCM (Curated mutations)DNAJC5G (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNAJC5G (select a term)
intoGenDNAJC5G
Cancer3DDNAJC5G(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613946   
Orphanet
DisGeNETDNAJC5G
MedgenDNAJC5G
Genetic Testing Registry DNAJC5G
NextProtQ8N7S2 [Medical]
TSGene285126
GENETestsDNAJC5G
Target ValidationDNAJC5G
Huge Navigator DNAJC5G [HugePedia]
snp3D : Map Gene to Disease285126
BioCentury BCIQDNAJC5G
ClinGenDNAJC5G
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285126
Chemical/Pharm GKB GenePA134880296
Clinical trialDNAJC5G
Miscellaneous
canSAR (ICR)DNAJC5G (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNAJC5G
EVEXDNAJC5G
GoPubMedDNAJC5G
iHOPDNAJC5G
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Jun 22 16:23:00 CEST 2018

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