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DNAJC9 (DnaJ heat shock protein family (Hsp40) member C9)

Identity

Alias (NCBI)HDJC9
JDD1
SB73
HGNC (Hugo) DNAJC9
HGNC Alias symbJDD1
SB73
HGNC Previous nameDnaJ (Hsp40) homolog, subfamily C, member 9
LocusID (NCBI) 23234
Atlas_Id 47031
Location 10q22.2  [Link to chromosome band 10q22]
Location_base_pair Starts at 73241956 and ends at 73247255 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SMU1 (9p21.1) / DNAJC9 (10q22.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)DNAJC9   19123
Cards
Entrez_Gene (NCBI)DNAJC9    DnaJ heat shock protein family (Hsp40) member C9
AliasesHDJC9; JDD1; SB73
GeneCards (Weizmann)DNAJC9
Ensembl hg19 (Hinxton)ENSG00000213551 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213551 [Gene_View]  ENSG00000213551 [Sequence]  chr10:73241956-73247255 [Contig_View]  DNAJC9 [Vega]
ICGC DataPortalENSG00000213551
TCGA cBioPortalDNAJC9
AceView (NCBI)DNAJC9
Genatlas (Paris)DNAJC9
SOURCE (Princeton)DNAJC9
Genetics Home Reference (NIH)DNAJC9
Genomic and cartography
GoldenPath hg38 (UCSC)DNAJC9  -     chr10:73241956-73247255 -  10q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNAJC9  -     10q22.2   [Description]    (hg19-Feb_2009)
GoldenPathDNAJC9 - 10q22.2 [CytoView hg19]  DNAJC9 - 10q22.2 [CytoView hg38]
ImmunoBaseENSG00000213551
Genome Data Viewer NCBIDNAJC9 [Mapview hg19]  
OMIM611206   
Gene and transcription
Genbank (Entrez)AF327347 AK074420 AK094162 BC136507 BQ002383
RefSeq transcript (Entrez)NM_015190
Consensus coding sequences : CCDS (NCBI)DNAJC9
Gene ExpressionDNAJC9 [ NCBI-GEO ]   DNAJC9 [ EBI - ARRAY_EXPRESS ]   DNAJC9 [ SEEK ]   DNAJC9 [ MEM ]
Gene Expression Viewer (FireBrowse)DNAJC9 [ Firebrowse - Broad ]
GenevisibleExpression of DNAJC9 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23234
GTEX Portal (Tissue expression)DNAJC9
Human Protein AtlasENSG00000213551-DNAJC9 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WXX5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WXX5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WXX5
PhosPhoSitePlusQ8WXX5
Domaine pattern : Prosite (Expaxy)DNAJ_1 (PS00636)    DNAJ_2 (PS50076)   
Domains : Interpro (EBI)DnaJ_domain    DnaJ_domain_CS    J_dom_sf   
Domain families : Pfam (Sanger)DnaJ (PF00226)   
Domain families : Pfam (NCBI)pfam00226   
Domain families : Smart (EMBL)DnaJ (SM00271)  
Conserved Domain (NCBI)DNAJC9
SuperfamilyQ8WXX5
AlphaFold pdb e-kbQ8WXX5   
Human Protein Atlas [tissue]ENSG00000213551-DNAJC9 [tissue]
HPRD13237
Protein Interaction databases
DIP (DOE-UCLA)Q8WXX5
IntAct (EBI)Q8WXX5
BioGRIDDNAJC9
STRING (EMBL)DNAJC9
ZODIACDNAJC9
Ontologies - Pathways
QuickGOQ8WXX5
Ontology : AmiGOprotein binding  extracellular space  nucleus  nucleus  nucleus  nucleoplasm  cytoplasm  cytoplasm  cytosol  plasma membrane  heat shock protein binding  heat shock protein binding  positive regulation of ATPase activity  
Ontology : EGO-EBIprotein binding  extracellular space  nucleus  nucleus  nucleus  nucleoplasm  cytoplasm  cytoplasm  cytosol  plasma membrane  heat shock protein binding  heat shock protein binding  positive regulation of ATPase activity  
NDEx NetworkDNAJC9
Atlas of Cancer Signalling NetworkDNAJC9
Wikipedia pathwaysDNAJC9
Orthology - Evolution
OrthoDB23234
GeneTree (enSembl)ENSG00000213551
Phylogenetic Trees/Animal Genes : TreeFamDNAJC9
Homologs : HomoloGeneDNAJC9
Homology/Alignments : Family Browser (UCSC)DNAJC9
Gene fusions - Rearrangements
Fusion : QuiverDNAJC9
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNAJC9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNAJC9
dbVarDNAJC9
ClinVarDNAJC9
MonarchDNAJC9
1000_GenomesDNAJC9 
Exome Variant ServerDNAJC9
GNOMAD BrowserENSG00000213551
Varsome BrowserDNAJC9
ACMGDNAJC9 variants
VarityQ8WXX5
Genomic Variants (DGV)DNAJC9 [DGVbeta]
DECIPHERDNAJC9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNAJC9 
Mutations
ICGC Data PortalDNAJC9 
TCGA Data PortalDNAJC9 
Broad Tumor PortalDNAJC9
OASIS PortalDNAJC9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNAJC9  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DDNAJC9
Mutations and Diseases : HGMDDNAJC9
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaDNAJC9
DgiDB (Drug Gene Interaction Database)DNAJC9
DoCM (Curated mutations)DNAJC9
CIViC (Clinical Interpretations of Variants in Cancer)DNAJC9
Cancer3DDNAJC9
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611206   
Orphanet
DisGeNETDNAJC9
MedgenDNAJC9
Genetic Testing Registry DNAJC9
NextProtQ8WXX5 [Medical]
GENETestsDNAJC9
Target ValidationDNAJC9
Huge Navigator DNAJC9 [HugePedia]
ClinGenDNAJC9
Clinical trials, drugs, therapy
MyCancerGenomeDNAJC9
Protein Interactions : CTDDNAJC9
Pharm GKB GenePA38797
PharosQ8WXX5
Clinical trialDNAJC9
Miscellaneous
canSAR (ICR)DNAJC9
HarmonizomeDNAJC9
DataMed IndexDNAJC9
Probes
Litterature
PubMed68 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXDNAJC9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:07:05 CEST 2021

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