Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

DNAL1 (dynein axonemal light chain 1)

Identity

Alias_namesC14orf168
chromosome 14 open reading frame 168
Alias_symbol (synonym)MGC12435
1700010H15RiK
CILD16
Other alias
HGNC (Hugo) DNAL1
LocusID (NCBI) 83544
Atlas_Id 52573
Location 14q24.3  [Link to chromosome band 14q24]
Location_base_pair Starts at 73644875 and ends at 73703728 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DNAL1 (14q24.3) / DNAL1 (14q24.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNAL1   23247
Cards
Entrez_Gene (NCBI)DNAL1  83544  dynein axonemal light chain 1
AliasesC14orf168; CILD16
GeneCards (Weizmann)DNAL1
Ensembl hg19 (Hinxton)ENSG00000119661 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000119661 [Gene_View]  chr14:73644875-73703728 [Contig_View]  DNAL1 [Vega]
ICGC DataPortalENSG00000119661
TCGA cBioPortalDNAL1
AceView (NCBI)DNAL1
Genatlas (Paris)DNAL1
WikiGenes83544
SOURCE (Princeton)DNAL1
Genetics Home Reference (NIH)DNAL1
Genomic and cartography
GoldenPath hg38 (UCSC)DNAL1  -     chr14:73644875-73703728 +  14q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNAL1  -     14q24.3   [Description]    (hg19-Feb_2009)
EnsemblDNAL1 - 14q24.3 [CytoView hg19]  DNAL1 - 14q24.3 [CytoView hg38]
Mapping of homologs : NCBIDNAL1 [Mapview hg19]  DNAL1 [Mapview hg38]
OMIM610062   614017   
Gene and transcription
Genbank (Entrez)AF542071 AI242197 AK026653 AK315392 AL833654
RefSeq transcript (Entrez)NM_001201366 NM_031427
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DNAL1
Cluster EST : UnigeneHs.271270 [ NCBI ]
CGAP (NCI)Hs.271270
Alternative Splicing GalleryENSG00000119661
Gene ExpressionDNAL1 [ NCBI-GEO ]   DNAL1 [ EBI - ARRAY_EXPRESS ]   DNAL1 [ SEEK ]   DNAL1 [ MEM ]
Gene Expression Viewer (FireBrowse)DNAL1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)83544
GTEX Portal (Tissue expression)DNAL1
Human Protein AtlasENSG00000119661-DNAL1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ4LDG9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ4LDG9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ4LDG9
Splice isoforms : SwissVarQ4LDG9
PhosPhoSitePlusQ4LDG9
Domaine pattern : Prosite (Expaxy)LRR (PS51450)   
Domains : Interpro (EBI)L_dom-like    Leu-rich_rpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DNAL1
DMDM Disease mutations83544
Blocks (Seattle)DNAL1
SuperfamilyQ4LDG9
Human Protein Atlas [tissue]ENSG00000119661-DNAL1 [tissue]
Peptide AtlasQ4LDG9
HPRD16616
IPIIPI00027761   IPI00830125   IPI01024781   IPI01024904   IPI01026437   IPI01026551   IPI01026174   IPI01026304   
Protein Interaction databases
DIP (DOE-UCLA)Q4LDG9
IntAct (EBI)Q4LDG9
FunCoupENSG00000119661
BioGRIDDNAL1
STRING (EMBL)DNAL1
ZODIACDNAL1
Ontologies - Pathways
QuickGOQ4LDG9
Ontology : AmiGO
Ontology : EGO-EBI
Pathways : KEGGHuntington's disease   
NDEx NetworkDNAL1
Atlas of Cancer Signalling NetworkDNAL1
Wikipedia pathwaysDNAL1
Orthology - Evolution
OrthoDB83544
GeneTree (enSembl)ENSG00000119661
Phylogenetic Trees/Animal Genes : TreeFamDNAL1
HOVERGENQ4LDG9
HOGENOMQ4LDG9
Homologs : HomoloGeneDNAL1
Homology/Alignments : Family Browser (UCSC)DNAL1
Gene fusions - Rearrangements
Tumor Fusion PortalDNAL1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNAL1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNAL1
dbVarDNAL1
ClinVarDNAL1
1000_GenomesDNAL1 
Exome Variant ServerDNAL1
ExAC (Exome Aggregation Consortium)ENSG00000119661
GNOMAD BrowserENSG00000119661
Genetic variants : HAPMAP83544
Genomic Variants (DGV)DNAL1 [DGVbeta]
DECIPHERDNAL1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNAL1 
Mutations
ICGC Data PortalDNAL1 
TCGA Data PortalDNAL1 
Broad Tumor PortalDNAL1
OASIS PortalDNAL1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNAL1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDNAL1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DNAL1
DgiDB (Drug Gene Interaction Database)DNAL1
DoCM (Curated mutations)DNAL1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNAL1 (select a term)
intoGenDNAL1
Cancer3DDNAL1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610062    614017   
Orphanet665   
DisGeNETDNAL1
MedgenDNAL1
Genetic Testing Registry DNAL1
NextProtQ4LDG9 [Medical]
TSGene83544
GENETestsDNAL1
Target ValidationDNAL1
Huge Navigator DNAL1 [HugePedia]
snp3D : Map Gene to Disease83544
BioCentury BCIQDNAL1
ClinGenDNAL1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD83544
Chemical/Pharm GKB GenePA162383938
Clinical trialDNAL1
Miscellaneous
canSAR (ICR)DNAL1 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNAL1
EVEXDNAL1
GoPubMedDNAL1
iHOPDNAL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 20:34:24 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.