Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

DNHD1 (dynein heavy chain domain 1)

Identity

Alias_namesDHCD1
C11orf47
DNHD1L
CCDC35
chromosome 11 open reading frame 47
dynein heavy chain domain 1-like
coiled-coil domain containing 35
Alias_symbol (synonym)FLJ32752
FLJ46184
FLJ35709
DKFZp686J0796
Other alias
HGNC (Hugo) DNHD1
LocusID (NCBI) 144132
Atlas_Id 62577
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 6497296 and ends at 6572024 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DNHD1 (11p15.4) / TCP11L1 (11p13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNHD1   26532
Cards
Entrez_Gene (NCBI)DNHD1  144132  dynein heavy chain domain 1
AliasesC11orf47; CCDC35; DHCD1; DNHD1L
GeneCards (Weizmann)DNHD1
Ensembl hg19 (Hinxton)ENSG00000179532 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000179532 [Gene_View]  chr11:6497296-6572024 [Contig_View]  DNHD1 [Vega]
ICGC DataPortalENSG00000179532
TCGA cBioPortalDNHD1
AceView (NCBI)DNHD1
Genatlas (Paris)DNHD1
WikiGenes144132
SOURCE (Princeton)DNHD1
Genetics Home Reference (NIH)DNHD1
Genomic and cartography
GoldenPath hg38 (UCSC)DNHD1  -     chr11:6497296-6572024 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNHD1  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblDNHD1 - 11p15.4 [CytoView hg19]  DNHD1 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIDNHD1 [Mapview hg19]  DNHD1 [Mapview hg38]
OMIM617277   
Gene and transcription
Genbank (Entrez)AB231767 AB231768 AB231769 AB231770 AB231771
RefSeq transcript (Entrez)NM_144666 NM_173589
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DNHD1
Cluster EST : UnigeneHs.720080 [ NCBI ]
CGAP (NCI)Hs.720080
Alternative Splicing GalleryENSG00000179532
Gene ExpressionDNHD1 [ NCBI-GEO ]   DNHD1 [ EBI - ARRAY_EXPRESS ]   DNHD1 [ SEEK ]   DNHD1 [ MEM ]
Gene Expression Viewer (FireBrowse)DNHD1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)144132
GTEX Portal (Tissue expression)DNHD1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96M86   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96M86  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96M86
Splice isoforms : SwissVarQ96M86
PhosPhoSitePlusQ96M86
Domains : Interpro (EBI)DHC_fam    Dynein_HC_stalk    Dynein_heavy_dom    Dynein_heavy_dom-2    P-loop_NTPase   
Domain families : Pfam (Sanger)DHC_N2 (PF08393)    Dynein_heavy (PF03028)    MT (PF12777)   
Domain families : Pfam (NCBI)pfam08393    pfam03028    pfam12777   
Conserved Domain (NCBI)DNHD1
DMDM Disease mutations144132
Blocks (Seattle)DNHD1
SuperfamilyQ96M86
Human Protein AtlasENSG00000179532
Peptide AtlasQ96M86
HPRD08137
IPIIPI00936051   IPI00167944   IPI00885211   IPI00977408   IPI00984347   IPI00983685   IPI00981652   IPI00982793   IPI00976912   IPI00985419   IPI00955964   IPI00981119   
Protein Interaction databases
DIP (DOE-UCLA)Q96M86
IntAct (EBI)Q96M86
FunCoupENSG00000179532
BioGRIDDNHD1
STRING (EMBL)DNHD1
ZODIACDNHD1
Ontologies - Pathways
QuickGOQ96M86
Ontology : AmiGOmicrotubule motor activity  microtubule-based movement  dynein complex  extracellular exosome  
Ontology : EGO-EBImicrotubule motor activity  microtubule-based movement  dynein complex  extracellular exosome  
NDEx NetworkDNHD1
Atlas of Cancer Signalling NetworkDNHD1
Wikipedia pathwaysDNHD1
Orthology - Evolution
OrthoDB144132
GeneTree (enSembl)ENSG00000179532
Phylogenetic Trees/Animal Genes : TreeFamDNHD1
HOVERGENQ96M86
HOGENOMQ96M86
Homologs : HomoloGeneDNHD1
Homology/Alignments : Family Browser (UCSC)DNHD1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNHD1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNHD1
dbVarDNHD1
ClinVarDNHD1
1000_GenomesDNHD1 
Exome Variant ServerDNHD1
ExAC (Exome Aggregation Consortium)DNHD1 (select the gene name)
Genetic variants : HAPMAP144132
Genomic Variants (DGV)DNHD1 [DGVbeta]
DECIPHERDNHD1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNHD1 
Mutations
ICGC Data PortalDNHD1 
TCGA Data PortalDNHD1 
Broad Tumor PortalDNHD1
OASIS PortalDNHD1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNHD1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDNHD1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DNHD1
DgiDB (Drug Gene Interaction Database)DNHD1
DoCM (Curated mutations)DNHD1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNHD1 (select a term)
intoGenDNHD1
Cancer3DDNHD1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617277   
Orphanet
MedgenDNHD1
Genetic Testing Registry DNHD1
NextProtQ96M86 [Medical]
TSGene144132
GENETestsDNHD1
Target ValidationDNHD1
Huge Navigator DNHD1 [HugePedia]
snp3D : Map Gene to Disease144132
BioCentury BCIQDNHD1
ClinGenDNHD1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD144132
Chemical/Pharm GKB GenePA142671968
Clinical trialDNHD1
Miscellaneous
canSAR (ICR)DNHD1 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNHD1
EVEXDNHD1
GoPubMedDNHD1
iHOPDNHD1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:06:31 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.