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DNLZ (DNL-type zinc finger)

Identity

Alias_namesC9orf151
chromosome 9 open reading frame 151
Alias_symbol (synonym)RP11-413M3.2
ZIM17
bA413M3.2
TIMM15
HEP
Other aliasHEP1
HGNC (Hugo) DNLZ
LocusID (NCBI) 728489
Atlas_Id 62578
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 136361900 and ends at 136363811 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNLZ   33879
Cards
Entrez_Gene (NCBI)DNLZ  728489  DNL-type zinc finger
AliasesC9orf151; HEP; HEP1; TIMM15; 
ZIM17; bA413M3.2
GeneCards (Weizmann)DNLZ
Ensembl hg19 (Hinxton)ENSG00000213221 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213221 [Gene_View]  chr9:136361900-136363811 [Contig_View]  DNLZ [Vega]
ICGC DataPortalENSG00000213221
TCGA cBioPortalDNLZ
AceView (NCBI)DNLZ
Genatlas (Paris)DNLZ
WikiGenes728489
SOURCE (Princeton)DNLZ
Genetics Home Reference (NIH)DNLZ
Genomic and cartography
GoldenPath hg38 (UCSC)DNLZ  -     chr9:136361900-136363811 -  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNLZ  -     9q34.3   [Description]    (hg19-Feb_2009)
EnsemblDNLZ - 9q34.3 [CytoView hg19]  DNLZ - 9q34.3 [CytoView hg38]
Mapping of homologs : NCBIDNLZ [Mapview hg19]  DNLZ [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI435052 AI696701 BC146915 BC146924 BC171835
RefSeq transcript (Entrez)NM_001080849
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DNLZ
Cluster EST : UnigeneHs.528581 [ NCBI ]
CGAP (NCI)Hs.528581
Alternative Splicing GalleryENSG00000213221
Gene ExpressionDNLZ [ NCBI-GEO ]   DNLZ [ EBI - ARRAY_EXPRESS ]   DNLZ [ SEEK ]   DNLZ [ MEM ]
Gene Expression Viewer (FireBrowse)DNLZ [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728489
GTEX Portal (Tissue expression)DNLZ
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5SXM8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5SXM8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5SXM8
Splice isoforms : SwissVarQ5SXM8
PhosPhoSitePlusQ5SXM8
Domaine pattern : Prosite (Expaxy)ZF_DNL (PS51501)   
Domains : Interpro (EBI)Mt_import_TIM15    Znf_DNL-typ   
Domain families : Pfam (Sanger)zf-DNL (PF05180)   
Domain families : Pfam (NCBI)pfam05180   
Conserved Domain (NCBI)DNLZ
DMDM Disease mutations728489
Blocks (Seattle)DNLZ
SuperfamilyQ5SXM8
Human Protein AtlasENSG00000213221
Peptide AtlasQ5SXM8
IPIIPI00401285   IPI00514266   
Protein Interaction databases
DIP (DOE-UCLA)Q5SXM8
IntAct (EBI)Q5SXM8
FunCoupENSG00000213221
BioGRIDDNLZ
STRING (EMBL)DNLZ
ZODIACDNLZ
Ontologies - Pathways
QuickGOQ5SXM8
Ontology : AmiGOnucleoplasm  mitochondrion  mitochondrion  protein folding  zinc ion binding  protein import into mitochondrial matrix  protein stabilization  chaperone binding  
Ontology : EGO-EBInucleoplasm  mitochondrion  mitochondrion  protein folding  zinc ion binding  protein import into mitochondrial matrix  protein stabilization  chaperone binding  
NDEx NetworkDNLZ
Atlas of Cancer Signalling NetworkDNLZ
Wikipedia pathwaysDNLZ
Orthology - Evolution
OrthoDB728489
GeneTree (enSembl)ENSG00000213221
Phylogenetic Trees/Animal Genes : TreeFamDNLZ
HOVERGENQ5SXM8
HOGENOMQ5SXM8
Homologs : HomoloGeneDNLZ
Homology/Alignments : Family Browser (UCSC)DNLZ
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNLZ [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNLZ
dbVarDNLZ
ClinVarDNLZ
1000_GenomesDNLZ 
Exome Variant ServerDNLZ
ExAC (Exome Aggregation Consortium)DNLZ (select the gene name)
Genetic variants : HAPMAP728489
Genomic Variants (DGV)DNLZ [DGVbeta]
DECIPHERDNLZ [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNLZ 
Mutations
ICGC Data PortalDNLZ 
TCGA Data PortalDNLZ 
Broad Tumor PortalDNLZ
OASIS PortalDNLZ [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNLZ  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDNLZ
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DNLZ
DgiDB (Drug Gene Interaction Database)DNLZ
DoCM (Curated mutations)DNLZ (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNLZ (select a term)
intoGenDNLZ
Cancer3DDNLZ(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDNLZ
Genetic Testing Registry DNLZ
NextProtQ5SXM8 [Medical]
TSGene728489
GENETestsDNLZ
Target ValidationDNLZ
Huge Navigator DNLZ [HugePedia]
snp3D : Map Gene to Disease728489
BioCentury BCIQDNLZ
ClinGenDNLZ
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728489
Chemical/Pharm GKB GenePA162384018
Clinical trialDNLZ
Miscellaneous
canSAR (ICR)DNLZ (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNLZ
EVEXDNLZ
GoPubMedDNLZ
iHOPDNLZ
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:46:15 CEST 2017

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