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DNMBP (dynamin binding protein)

Identity

Alias (NCBI)ARHGEF36
CTRCT48
TUBA
HGNC (Hugo) DNMBP
HGNC Alias symbKIAA1010
Tuba
ARHGEF36
HGNC Alias namescaffold protein TUBA
LocusID (NCBI) 23268
Atlas_Id 43231
Location 10q24.2  [Link to chromosome band 10q24]
Location_base_pair Starts at 99875577 and ends at 100009947 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DNMBP (10q24.2) / LURAP1L (9p23)DNMBP (10q24.2) / PAPPA2 (1q25.2)DNMBP (10q24.2) / PER1 (17p13.1)
DNMBP (10q24.2) / TPTE2 (13q12.11)DNMBP 10q24.2 / TPTE2 13q12.11

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

 

Nomenclature
HGNC (Hugo)DNMBP   30373
Cards
Entrez_Gene (NCBI)DNMBP    dynamin binding protein
AliasesARHGEF36; CTRCT48; TUBA
GeneCards (Weizmann)DNMBP
Ensembl hg19 (Hinxton)ENSG00000107554 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000107554 [Gene_View]  ENSG00000107554 [Sequence]  chr10:99875577-100009947 [Contig_View]  DNMBP [Vega]
ICGC DataPortalENSG00000107554
TCGA cBioPortalDNMBP
AceView (NCBI)DNMBP
Genatlas (Paris)DNMBP
SOURCE (Princeton)DNMBP
Genetics Home Reference (NIH)DNMBP
Genomic and cartography
GoldenPath hg38 (UCSC)DNMBP  -     chr10:99875577-100009947 -  10q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNMBP  -     10q24.2   [Description]    (hg19-Feb_2009)
GoldenPathDNMBP - 10q24.2 [CytoView hg19]  DNMBP - 10q24.2 [CytoView hg38]
ImmunoBaseENSG00000107554
Genome Data Viewer NCBIDNMBP [Mapview hg19]  
OMIM611282   618415   
Gene and transcription
Genbank (Entrez)AA194064 AA771860 AB023227 AI023943 AK128576
RefSeq transcript (Entrez)NM_001318326 NM_001318327 NM_015221
Consensus coding sequences : CCDS (NCBI)DNMBP
Gene ExpressionDNMBP [ NCBI-GEO ]   DNMBP [ EBI - ARRAY_EXPRESS ]   DNMBP [ SEEK ]   DNMBP [ MEM ]
Gene Expression Viewer (FireBrowse)DNMBP [ Firebrowse - Broad ]
GenevisibleExpression of DNMBP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23268
GTEX Portal (Tissue expression)DNMBP
Human Protein AtlasENSG00000107554-DNMBP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6XZF7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6XZF7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6XZF7
PhosPhoSitePlusQ6XZF7
Domaine pattern : Prosite (Expaxy)BAR (PS51021)    DH_1 (PS00741)    DH_2 (PS50010)    SH3 (PS50002)   
Domains : Interpro (EBI)AH/BAR_dom_sf    BAR_dom    DBL_dom_sf    DH-domain    DNMBP    DNMBP_SH3_C1    DNMBP_SH3_N1    DNMBP_SH3_N2    DNMBP_SH3_N3    GDS_CDC24_CS    SH3-like_dom_sf    SH3_domain   
Domain families : Pfam (Sanger)BAR (PF03114)    RhoGEF (PF00621)    SH3_1 (PF00018)    SH3_2 (PF07653)    SH3_9 (PF14604)   
Domain families : Pfam (NCBI)pfam03114    pfam00621    pfam00018    pfam07653    pfam14604   
Domain families : Smart (EMBL)BAR (SM00721)  RhoGEF (SM00325)  SH3 (SM00326)  
Conserved Domain (NCBI)DNMBP
PDB (RSDB)1UG1    1UHC    4CC2    4CC3    4CC4    4CC7    4GLM   
PDB Europe1UG1    1UHC    4CC2    4CC3    4CC4    4CC7    4GLM   
PDB (PDBSum)1UG1    1UHC    4CC2    4CC3    4CC4    4CC7    4GLM   
PDB (IMB)1UG1    1UHC    4CC2    4CC3    4CC4    4CC7    4GLM   
Structural Biology KnowledgeBase1UG1    1UHC    4CC2    4CC3    4CC4    4CC7    4GLM   
SCOP (Structural Classification of Proteins)1UG1    1UHC    4CC2    4CC3    4CC4    4CC7    4GLM   
CATH (Classification of proteins structures)1UG1    1UHC    4CC2    4CC3    4CC4    4CC7    4GLM   
SuperfamilyQ6XZF7
AlphaFold pdb e-kbQ6XZF7   
Human Protein Atlas [tissue]ENSG00000107554-DNMBP [tissue]
HPRD10918
Protein Interaction databases
DIP (DOE-UCLA)Q6XZF7
IntAct (EBI)Q6XZF7
BioGRIDDNMBP
STRING (EMBL)DNMBP
ZODIACDNMBP
Ontologies - Pathways
QuickGOQ6XZF7
Ontology : AmiGOguanyl-nucleotide exchange factor activity  protein binding  Golgi apparatus  Golgi stack  cytoskeleton  cell-cell junction  aging  regulation of cell shape  intracellular signal transduction  synapse  regulation of catalytic activity  presynapse  
Ontology : EGO-EBIguanyl-nucleotide exchange factor activity  protein binding  Golgi apparatus  Golgi stack  cytoskeleton  cell-cell junction  aging  regulation of cell shape  intracellular signal transduction  synapse  regulation of catalytic activity  presynapse  
NDEx NetworkDNMBP
Atlas of Cancer Signalling NetworkDNMBP
Wikipedia pathwaysDNMBP
Orthology - Evolution
OrthoDB23268
GeneTree (enSembl)ENSG00000107554
Phylogenetic Trees/Animal Genes : TreeFamDNMBP
Homologs : HomoloGeneDNMBP
Homology/Alignments : Family Browser (UCSC)DNMBP
Gene fusions - Rearrangements
Fusion : MitelmanDNMBP/TPTE2 [10q24.2/13q12.11]  
Fusion : QuiverDNMBP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNMBP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNMBP
dbVarDNMBP
ClinVarDNMBP
MonarchDNMBP
1000_GenomesDNMBP 
Exome Variant ServerDNMBP
GNOMAD BrowserENSG00000107554
Varsome BrowserDNMBP
ACMGDNMBP variants
VarityQ6XZF7
Genomic Variants (DGV)DNMBP [DGVbeta]
DECIPHERDNMBP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNMBP 
Mutations
ICGC Data PortalDNMBP 
TCGA Data PortalDNMBP 
Broad Tumor PortalDNMBP
OASIS PortalDNMBP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNMBP  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DDNMBP
Mutations and Diseases : HGMDDNMBP
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaDNMBP
DgiDB (Drug Gene Interaction Database)DNMBP
DoCM (Curated mutations)DNMBP
CIViC (Clinical Interpretations of Variants in Cancer)DNMBP
Cancer3DDNMBP
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611282    618415   
Orphanet
DisGeNETDNMBP
MedgenDNMBP
Genetic Testing Registry DNMBP
NextProtQ6XZF7 [Medical]
GENETestsDNMBP
Target ValidationDNMBP
Huge Navigator DNMBP [HugePedia]
ClinGenDNMBP
Clinical trials, drugs, therapy
MyCancerGenomeDNMBP
Protein Interactions : CTDDNMBP
Pharm GKB GenePA134950706
PharosQ6XZF7
Clinical trialDNMBP
Miscellaneous
canSAR (ICR)DNMBP
HarmonizomeDNMBP
DataMed IndexDNMBP
Probes
Litterature
PubMed41 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXDNMBP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:07:08 CEST 2021
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