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DNTTIP1 (deoxynucleotidyltransferase, terminal, interacting protein 1)

Identity

Alias_namesC20orf167
chromosome 20 open reading frame 167
deoxynucleotidyltransferase, terminal, interacting protein 1
Alias_symbol (synonym)dJ447F3.4
Tdif1
Other alias
HGNC (Hugo) DNTTIP1
LocusID (NCBI) 116092
Atlas_Id 62585
Location 20q13.12  [Link to chromosome band 20q13]
Location_base_pair Starts at 44420576 and ends at 44440066 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
DHX35 (20q11.23) / DNTTIP1 (20q13.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNTTIP1   16160
Cards
Entrez_Gene (NCBI)DNTTIP1  116092  deoxynucleotidyltransferase, terminal, interacting protein 1
AliasesC20orf167; Tdif1; dJ447F3.4
GeneCards (Weizmann)DNTTIP1
Ensembl hg19 (Hinxton)ENSG00000101457 [Gene_View]  chr20:44420576-44440066 [Contig_View]  DNTTIP1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000101457 [Gene_View]  chr20:44420576-44440066 [Contig_View]  DNTTIP1 [Vega]
ICGC DataPortalENSG00000101457
TCGA cBioPortalDNTTIP1
AceView (NCBI)DNTTIP1
Genatlas (Paris)DNTTIP1
WikiGenes116092
SOURCE (Princeton)DNTTIP1
Genetics Home Reference (NIH)DNTTIP1
Genomic and cartography
GoldenPath hg19 (UCSC)DNTTIP1  -     chr20:44420576-44440066 +  20q13.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DNTTIP1  -     20q13.12   [Description]    (hg38-Dec_2013)
EnsemblDNTTIP1 - 20q13.12 [CytoView hg19]  DNTTIP1 - 20q13.12 [CytoView hg38]
Mapping of homologs : NCBIDNTTIP1 [Mapview hg19]  DNTTIP1 [Mapview hg38]
OMIM611388   
Gene and transcription
Genbank (Entrez)AB035676 AI538721 AK314003 BC009535 BC024290
RefSeq transcript (Entrez)NM_052951
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011362 NW_004929418
Consensus coding sequences : CCDS (NCBI)DNTTIP1
Cluster EST : UnigeneHs.472852 [ NCBI ]
CGAP (NCI)Hs.472852
Alternative Splicing GalleryENSG00000101457
Gene ExpressionDNTTIP1 [ NCBI-GEO ]   DNTTIP1 [ EBI - ARRAY_EXPRESS ]   DNTTIP1 [ SEEK ]   DNTTIP1 [ MEM ]
Gene Expression Viewer (FireBrowse)DNTTIP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)116092
GTEX Portal (Tissue expression)DNTTIP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H147   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H147  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H147
Splice isoforms : SwissVarQ9H147
PhosPhoSitePlusQ9H147
Domains : Interpro (EBI)TdIF1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DNTTIP1
DMDM Disease mutations116092
Blocks (Seattle)DNTTIP1
PDB (SRS)2MWI    4D6K   
PDB (PDBSum)2MWI    4D6K   
PDB (IMB)2MWI    4D6K   
PDB (RSDB)2MWI    4D6K   
Structural Biology KnowledgeBase2MWI    4D6K   
SCOP (Structural Classification of Proteins)2MWI    4D6K   
CATH (Classification of proteins structures)2MWI    4D6K   
SuperfamilyQ9H147
Human Protein AtlasENSG00000101457
Peptide AtlasQ9H147
HPRD16831
IPIIPI00057097   IPI00939798   IPI00513998   IPI00514967   IPI00642460   IPI00640751   
Protein Interaction databases
DIP (DOE-UCLA)Q9H147
IntAct (EBI)Q9H147
FunCoupENSG00000101457
BioGRIDDNTTIP1
STRING (EMBL)DNTTIP1
ZODIACDNTTIP1
Ontologies - Pathways
QuickGOQ9H147
Ontology : AmiGOhistone deacetylase complex  DNA binding  protein binding  nucleus  nucleoplasm  nucleolus  transcription, DNA-templated  regulation of transcription, DNA-templated  nucleosome binding  protein homodimerization activity  
Ontology : EGO-EBIhistone deacetylase complex  DNA binding  protein binding  nucleus  nucleoplasm  nucleolus  transcription, DNA-templated  regulation of transcription, DNA-templated  nucleosome binding  protein homodimerization activity  
NDEx NetworkDNTTIP1
Atlas of Cancer Signalling NetworkDNTTIP1
Wikipedia pathwaysDNTTIP1
Orthology - Evolution
OrthoDB116092
GeneTree (enSembl)ENSG00000101457
Phylogenetic Trees/Animal Genes : TreeFamDNTTIP1
HOVERGENQ9H147
HOGENOMQ9H147
Homologs : HomoloGeneDNTTIP1
Homology/Alignments : Family Browser (UCSC)DNTTIP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNTTIP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNTTIP1
dbVarDNTTIP1
ClinVarDNTTIP1
1000_GenomesDNTTIP1 
Exome Variant ServerDNTTIP1
ExAC (Exome Aggregation Consortium)DNTTIP1 (select the gene name)
Genetic variants : HAPMAP116092
Genomic Variants (DGV)DNTTIP1 [DGVbeta]
DECIPHER (Syndromes)20:44420576-44440066  ENSG00000101457
CONAN: Copy Number AnalysisDNTTIP1 
Mutations
ICGC Data PortalDNTTIP1 
TCGA Data PortalDNTTIP1 
Broad Tumor PortalDNTTIP1
OASIS PortalDNTTIP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNTTIP1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDNTTIP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DNTTIP1
DgiDB (Drug Gene Interaction Database)DNTTIP1
DoCM (Curated mutations)DNTTIP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNTTIP1 (select a term)
intoGenDNTTIP1
Cancer3DDNTTIP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611388   
Orphanet
MedgenDNTTIP1
Genetic Testing Registry DNTTIP1
NextProtQ9H147 [Medical]
TSGene116092
GENETestsDNTTIP1
Huge Navigator DNTTIP1 [HugePedia]
snp3D : Map Gene to Disease116092
BioCentury BCIQDNTTIP1
ClinGenDNTTIP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD116092
Chemical/Pharm GKB GenePA25709
Clinical trialDNTTIP1
Miscellaneous
canSAR (ICR)DNTTIP1 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNTTIP1
EVEXDNTTIP1
GoPubMedDNTTIP1
iHOPDNTTIP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:02:03 CET 2017

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