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DNTTIP1 (deoxynucleotidyltransferase terminal interacting protein 1)

Identity

Alias (NCBI)C20orf167
Tdif1
dJ447F3.4
HGNC (Hugo) DNTTIP1
HGNC Alias symbdJ447F3.4
Tdif1
HGNC Alias namenovel protein similar to synaptotagmin 1 (SYT1, P65) (isoform 1)
 TdT binding protein
HGNC Previous nameC20orf167
HGNC Previous namechromosome 20 open reading frame 167
 deoxynucleotidyltransferase, terminal, interacting protein 1
LocusID (NCBI) 116092
Atlas_Id 57988
Location 20q13.12  [Link to chromosome band 20q13]
Location_base_pair Starts at 45791954 and ends at 45811418 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DHX35 (20q11.23) / DNTTIP1 (20q13.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)DNTTIP1   16160
Cards
Entrez_Gene (NCBI)DNTTIP1    deoxynucleotidyltransferase terminal interacting protein 1
AliasesC20orf167; Tdif1; dJ447F3.4
GeneCards (Weizmann)DNTTIP1
Ensembl hg19 (Hinxton)ENSG00000101457 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000101457 [Gene_View]  ENSG00000101457 [Sequence]  chr20:45791954-45811418 [Contig_View]  DNTTIP1 [Vega]
ICGC DataPortalENSG00000101457
TCGA cBioPortalDNTTIP1
AceView (NCBI)DNTTIP1
Genatlas (Paris)DNTTIP1
SOURCE (Princeton)DNTTIP1
Genetics Home Reference (NIH)DNTTIP1
Genomic and cartography
GoldenPath hg38 (UCSC)DNTTIP1  -     chr20:45791954-45811418 +  20q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNTTIP1  -     20q13.12   [Description]    (hg19-Feb_2009)
GoldenPathDNTTIP1 - 20q13.12 [CytoView hg19]  DNTTIP1 - 20q13.12 [CytoView hg38]
ImmunoBaseENSG00000101457
Genome Data Viewer NCBIDNTTIP1 [Mapview hg19]  
OMIM611388   
Gene and transcription
Genbank (Entrez)AB035676 AI538721 AK314003 BC009535 BC024290
RefSeq transcript (Entrez)NM_052951
Consensus coding sequences : CCDS (NCBI)DNTTIP1
Gene ExpressionDNTTIP1 [ NCBI-GEO ]   DNTTIP1 [ EBI - ARRAY_EXPRESS ]   DNTTIP1 [ SEEK ]   DNTTIP1 [ MEM ]
Gene Expression Viewer (FireBrowse)DNTTIP1 [ Firebrowse - Broad ]
GenevisibleExpression of DNTTIP1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)116092
GTEX Portal (Tissue expression)DNTTIP1
Human Protein AtlasENSG00000101457-DNTTIP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H147   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H147  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H147
PhosPhoSitePlusQ9H147
Domains : Interpro (EBI)DNTTIP1_dimer    TdIF1   
Domain families : Pfam (Sanger)DNTTIP1_dimer (PF18192)   
Domain families : Pfam (NCBI)pfam18192   
Conserved Domain (NCBI)DNTTIP1
PDB (RSDB)2MWI    4D6K    6Z2J    6Z2K   
PDB Europe2MWI    4D6K    6Z2J    6Z2K   
PDB (PDBSum)2MWI    4D6K    6Z2J    6Z2K   
PDB (IMB)2MWI    4D6K    6Z2J    6Z2K   
Structural Biology KnowledgeBase2MWI    4D6K    6Z2J    6Z2K   
SCOP (Structural Classification of Proteins)2MWI    4D6K    6Z2J    6Z2K   
CATH (Classification of proteins structures)2MWI    4D6K    6Z2J    6Z2K   
SuperfamilyQ9H147
AlphaFold pdb e-kbQ9H147   
Human Protein Atlas [tissue]ENSG00000101457-DNTTIP1 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q9H147
IntAct (EBI)Q9H147
BioGRIDDNTTIP1
STRING (EMBL)DNTTIP1
ZODIACDNTTIP1
Ontologies - Pathways
QuickGOQ9H147
Ontology : AmiGOhistone deacetylase complex  DNA binding  DNA binding  protein binding  nucleus  nucleus  nucleoplasm  chromosome  nucleolus  nucleosome binding  nucleosome binding  protein homodimerization activity  
Ontology : EGO-EBIhistone deacetylase complex  DNA binding  DNA binding  protein binding  nucleus  nucleus  nucleoplasm  chromosome  nucleolus  nucleosome binding  nucleosome binding  protein homodimerization activity  
NDEx NetworkDNTTIP1
Atlas of Cancer Signalling NetworkDNTTIP1
Wikipedia pathwaysDNTTIP1
Orthology - Evolution
OrthoDB116092
GeneTree (enSembl)ENSG00000101457
Phylogenetic Trees/Animal Genes : TreeFamDNTTIP1
Homologs : HomoloGeneDNTTIP1
Homology/Alignments : Family Browser (UCSC)DNTTIP1
Gene fusions - Rearrangements
Fusion : QuiverDNTTIP1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNTTIP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNTTIP1
dbVarDNTTIP1
ClinVarDNTTIP1
MonarchDNTTIP1
1000_GenomesDNTTIP1 
Exome Variant ServerDNTTIP1
GNOMAD BrowserENSG00000101457
Varsome BrowserDNTTIP1
ACMGDNTTIP1 variants
VarityQ9H147
Genomic Variants (DGV)DNTTIP1 [DGVbeta]
DECIPHERDNTTIP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNTTIP1 
Mutations
ICGC Data PortalDNTTIP1 
TCGA Data PortalDNTTIP1 
Broad Tumor PortalDNTTIP1
OASIS PortalDNTTIP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNTTIP1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DDNTTIP1
Mutations and Diseases : HGMDDNTTIP1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaDNTTIP1
DgiDB (Drug Gene Interaction Database)DNTTIP1
DoCM (Curated mutations)DNTTIP1
CIViC (Clinical Interpretations of Variants in Cancer)DNTTIP1
Cancer3DDNTTIP1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611388   
Orphanet
DisGeNETDNTTIP1
MedgenDNTTIP1
Genetic Testing Registry DNTTIP1
NextProtQ9H147 [Medical]
GENETestsDNTTIP1
Target ValidationDNTTIP1
Huge Navigator DNTTIP1 [HugePedia]
ClinGenDNTTIP1
Clinical trials, drugs, therapy
MyCancerGenomeDNTTIP1
Protein Interactions : CTDDNTTIP1
Pharm GKB GenePA25709
PharosQ9H147
Clinical trialDNTTIP1
Miscellaneous
canSAR (ICR)DNTTIP1
HarmonizomeDNTTIP1
DataMed IndexDNTTIP1
Probes
Litterature
PubMed43 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXDNTTIP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:07:09 CEST 2021

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