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DNTTIP2 (deoxynucleotidyltransferase terminal interacting protein 2)

Identity

Alias_namesdeoxynucleotidyltransferase, terminal, interacting protein 2
Alias_symbol (synonym)HSU15552
ERBP
TdIF2
Other aliasFCF2
LPTS-RP2
HGNC (Hugo) DNTTIP2
LocusID (NCBI) 30836
Atlas_Id 62586
Location 1p22.1  [Link to chromosome band 1p22]
Location_base_pair Starts at 93869458 and ends at 93879206 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DNTTIP2 (1p22.1) / GCLM (1p22.1)LOC647946 () / DNTTIP2 (1p22.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DNTTIP2   24013
Cards
Entrez_Gene (NCBI)DNTTIP2  30836  deoxynucleotidyltransferase terminal interacting protein 2
AliasesERBP; FCF2; HSU15552; LPTS-RP2; 
TdIF2
GeneCards (Weizmann)DNTTIP2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:93869458-93879206 [Contig_View]  DNTTIP2 [Vega]
TCGA cBioPortalDNTTIP2
AceView (NCBI)DNTTIP2
Genatlas (Paris)DNTTIP2
WikiGenes30836
SOURCE (Princeton)DNTTIP2
Genetics Home Reference (NIH)DNTTIP2
Genomic and cartography
GoldenPath hg38 (UCSC)DNTTIP2  -     chr1:93869458-93879206 -  1p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNTTIP2  -     1p22.1   [Description]    (hg19-Feb_2009)
EnsemblDNTTIP2 - 1p22.1 [CytoView hg19]  DNTTIP2 - 1p22.1 [CytoView hg38]
Mapping of homologs : NCBIDNTTIP2 [Mapview hg19]  DNTTIP2 [Mapview hg38]
OMIM611199   
Gene and transcription
Genbank (Entrez)AA832262 AB046574 AI436814 AK123702 AK222722
RefSeq transcript (Entrez)NM_014597
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DNTTIP2
Cluster EST : UnigeneHs.601998 [ NCBI ]
CGAP (NCI)Hs.601998
Gene ExpressionDNTTIP2 [ NCBI-GEO ]   DNTTIP2 [ EBI - ARRAY_EXPRESS ]   DNTTIP2 [ SEEK ]   DNTTIP2 [ MEM ]
Gene Expression Viewer (FireBrowse)DNTTIP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)30836
GTEX Portal (Tissue expression)DNTTIP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5QJE6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5QJE6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5QJE6
Splice isoforms : SwissVarQ5QJE6
PhosPhoSitePlusQ5QJE6
Domains : Interpro (EBI)Fcf2   
Domain families : Pfam (Sanger)Fcf2 (PF08698)   
Domain families : Pfam (NCBI)pfam08698   
Conserved Domain (NCBI)DNTTIP2
DMDM Disease mutations30836
Blocks (Seattle)DNTTIP2
SuperfamilyQ5QJE6
Peptide AtlasQ5QJE6
HPRD09994
IPIIPI00290410   IPI00921860   IPI00982927   
Protein Interaction databases
DIP (DOE-UCLA)Q5QJE6
IntAct (EBI)Q5QJE6
BioGRIDDNTTIP2
STRING (EMBL)DNTTIP2
ZODIACDNTTIP2
Ontologies - Pathways
QuickGOQ5QJE6
Ontology : AmiGORNA binding  nucleus  nucleolus  transcription, DNA-templated  regulation of transcription, DNA-templated  
Ontology : EGO-EBIRNA binding  nucleus  nucleolus  transcription, DNA-templated  regulation of transcription, DNA-templated  
NDEx NetworkDNTTIP2
Atlas of Cancer Signalling NetworkDNTTIP2
Wikipedia pathwaysDNTTIP2
Orthology - Evolution
OrthoDB30836
Phylogenetic Trees/Animal Genes : TreeFamDNTTIP2
HOVERGENQ5QJE6
HOGENOMQ5QJE6
Homologs : HomoloGeneDNTTIP2
Homology/Alignments : Family Browser (UCSC)DNTTIP2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNTTIP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNTTIP2
dbVarDNTTIP2
ClinVarDNTTIP2
1000_GenomesDNTTIP2 
Exome Variant ServerDNTTIP2
ExAC (Exome Aggregation Consortium)DNTTIP2 (select the gene name)
Genetic variants : HAPMAP30836
Genomic Variants (DGV)DNTTIP2 [DGVbeta]
DECIPHERDNTTIP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNTTIP2 
Mutations
ICGC Data PortalDNTTIP2 
TCGA Data PortalDNTTIP2 
Broad Tumor PortalDNTTIP2
OASIS PortalDNTTIP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNTTIP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDNTTIP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DNTTIP2
DgiDB (Drug Gene Interaction Database)DNTTIP2
DoCM (Curated mutations)DNTTIP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNTTIP2 (select a term)
intoGenDNTTIP2
Cancer3DDNTTIP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611199   
Orphanet
MedgenDNTTIP2
Genetic Testing Registry DNTTIP2
NextProtQ5QJE6 [Medical]
TSGene30836
GENETestsDNTTIP2
Target ValidationDNTTIP2
Huge Navigator DNTTIP2 [HugePedia]
snp3D : Map Gene to Disease30836
BioCentury BCIQDNTTIP2
ClinGenDNTTIP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD30836
Chemical/Pharm GKB GenePA142671963
Clinical trialDNTTIP2
Miscellaneous
canSAR (ICR)DNTTIP2 (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNTTIP2
EVEXDNTTIP2
GoPubMedDNTTIP2
iHOPDNTTIP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:06:32 CEST 2017

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