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DOCK9 (dedicator of cytokinesis 9)

Identity

Alias_symbol (synonym)KIAA1058
ZIZ1
Other aliasZIZIMIN1
HGNC (Hugo) DOCK9
LocusID (NCBI) 23348
Atlas_Id 62592
Location 13q32.3  [Link to chromosome band 13q32]
Location_base_pair Starts at 98793487 and ends at 98978084 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
BAZ1A (14q13.1) / DOCK9 (13q32.3)DOCK9 (13q32.3) / BAZ1A (14q13.1)DOCK9 (13q32.3) / GRAMD1B (11q24.1)
DOCK9 (13q32.3) / SPACA7 (13q34)DOCK9 (13q32.3) / STK24 (13q32.2)ERBB3 (12q13.2) / DOCK9 (13q32.3)
UFD1L (22q11.21) / DOCK9 (13q32.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DOCK9   14132
Cards
Entrez_Gene (NCBI)DOCK9  23348  dedicator of cytokinesis 9
AliasesZIZ1; ZIZIMIN1
GeneCards (Weizmann)DOCK9
Ensembl hg19 (Hinxton)ENSG00000088387 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000088387 [Gene_View]  chr13:98793487-98978084 [Contig_View]  DOCK9 [Vega]
ICGC DataPortalENSG00000088387
TCGA cBioPortalDOCK9
AceView (NCBI)DOCK9
Genatlas (Paris)DOCK9
WikiGenes23348
SOURCE (Princeton)DOCK9
Genetics Home Reference (NIH)DOCK9
Genomic and cartography
GoldenPath hg38 (UCSC)DOCK9  -     chr13:98793487-98978084 -  13q32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DOCK9  -     13q32.3   [Description]    (hg19-Feb_2009)
EnsemblDOCK9 - 13q32.3 [CytoView hg19]  DOCK9 - 13q32.3 [CytoView hg38]
Mapping of homologs : NCBIDOCK9 [Mapview hg19]  DOCK9 [Mapview hg38]
OMIM607325   
Gene and transcription
Genbank (Entrez)AB028981 AF085864 AF339774 AF527605 AK022011
RefSeq transcript (Entrez)NM_001130048 NM_001130049 NM_001130050 NM_001318849 NM_015296
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DOCK9
Cluster EST : UnigeneHs.596105 [ NCBI ]
CGAP (NCI)Hs.596105
Alternative Splicing GalleryENSG00000088387
Gene ExpressionDOCK9 [ NCBI-GEO ]   DOCK9 [ EBI - ARRAY_EXPRESS ]   DOCK9 [ SEEK ]   DOCK9 [ MEM ]
Gene Expression Viewer (FireBrowse)DOCK9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23348
GTEX Portal (Tissue expression)DOCK9
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BZ29   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BZ29  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BZ29
Splice isoforms : SwissVarQ9BZ29
PhosPhoSitePlusQ9BZ29
Domaine pattern : Prosite (Expaxy)DHR_1 (PS51650)    DHR_2 (PS51651)    PH_DOMAIN (PS50003)   
Domains : Interpro (EBI)ARM-type_fold    DHR-1_domain    DHR-2    DOCK    DOCK9    DOCK_C    DOCK_C/D_N    PH_dom-like    PH_domain   
Domain families : Pfam (Sanger)DHR-2 (PF06920)    DOCK-C2 (PF14429)    DUF3398 (PF11878)    PH (PF00169)   
Domain families : Pfam (NCBI)pfam06920    pfam14429    pfam11878    pfam00169   
Domain families : Smart (EMBL)PH (SM00233)  
Conserved Domain (NCBI)DOCK9
DMDM Disease mutations23348
Blocks (Seattle)DOCK9
PDB (SRS)1WG7    2WM9    2WMN    2WMO   
PDB (PDBSum)1WG7    2WM9    2WMN    2WMO   
PDB (IMB)1WG7    2WM9    2WMN    2WMO   
PDB (RSDB)1WG7    2WM9    2WMN    2WMO   
Structural Biology KnowledgeBase1WG7    2WM9    2WMN    2WMO   
SCOP (Structural Classification of Proteins)1WG7    2WM9    2WMN    2WMO   
CATH (Classification of proteins structures)1WG7    2WM9    2WMN    2WMO   
SuperfamilyQ9BZ29
Human Protein AtlasENSG00000088387
Peptide AtlasQ9BZ29
HPRD09542
IPIIPI00332567   IPI01012860   IPI00719015   IPI00956513   IPI00952615   IPI00743652   IPI00873308   IPI00151888   IPI00216408   IPI00911071   IPI00943086   IPI01008864   
Protein Interaction databases
DIP (DOE-UCLA)Q9BZ29
IntAct (EBI)Q9BZ29
FunCoupENSG00000088387
BioGRIDDOCK9
STRING (EMBL)DOCK9
ZODIACDOCK9
Ontologies - Pathways
QuickGOQ9BZ29
Ontology : AmiGOguanyl-nucleotide exchange factor activity  protein binding  cytosol  small GTPase mediated signal transduction  blood coagulation  biological_process  endomembrane system  membrane  positive regulation of GTPase activity  cadherin binding  
Ontology : EGO-EBIguanyl-nucleotide exchange factor activity  protein binding  cytosol  small GTPase mediated signal transduction  blood coagulation  biological_process  endomembrane system  membrane  positive regulation of GTPase activity  cadherin binding  
NDEx NetworkDOCK9
Atlas of Cancer Signalling NetworkDOCK9
Wikipedia pathwaysDOCK9
Orthology - Evolution
OrthoDB23348
GeneTree (enSembl)ENSG00000088387
Phylogenetic Trees/Animal Genes : TreeFamDOCK9
HOVERGENQ9BZ29
HOGENOMQ9BZ29
Homologs : HomoloGeneDOCK9
Homology/Alignments : Family Browser (UCSC)DOCK9
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDOCK9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DOCK9
dbVarDOCK9
ClinVarDOCK9
1000_GenomesDOCK9 
Exome Variant ServerDOCK9
ExAC (Exome Aggregation Consortium)DOCK9 (select the gene name)
Genetic variants : HAPMAP23348
Genomic Variants (DGV)DOCK9 [DGVbeta]
DECIPHERDOCK9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDOCK9 
Mutations
ICGC Data PortalDOCK9 
TCGA Data PortalDOCK9 
Broad Tumor PortalDOCK9
OASIS PortalDOCK9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDOCK9  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDOCK9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DOCK9
DgiDB (Drug Gene Interaction Database)DOCK9
DoCM (Curated mutations)DOCK9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DOCK9 (select a term)
intoGenDOCK9
Cancer3DDOCK9(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607325   
Orphanet
MedgenDOCK9
Genetic Testing Registry DOCK9
NextProtQ9BZ29 [Medical]
TSGene23348
GENETestsDOCK9
Target ValidationDOCK9
Huge Navigator DOCK9 [HugePedia]
snp3D : Map Gene to Disease23348
BioCentury BCIQDOCK9
ClinGenDOCK9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23348
Chemical/Pharm GKB GenePA134877754
Clinical trialDOCK9
Miscellaneous
canSAR (ICR)DOCK9 (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDOCK9
EVEXDOCK9
GoPubMedDOCK9
iHOPDOCK9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:06:32 CEST 2017

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