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DONSON (downstream neighbor of SON)

Identity

Alias_namesC21orf60
Alias_symbol (synonym)B17
C2TA
DKFZP434M035
Other alias
HGNC (Hugo) DONSON
LocusID (NCBI) 29980
Atlas_Id 62598
Location 21q22.11  [Link to chromosome band 21q22]
Location_base_pair Starts at 34949859 and ends at 34961014 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ARHGAP32 (11q24.3) / DONSON (21q22.11)CALD1 (7q33) / DONSON (21q22.11)DONSON (21q22.11) / DONSON (21q22.11)
DONSON (21q22.11) / PARG (10q11.23)DONSON (21q22.11) / TGFB1 (19q13.2)NADK2 (5p13.2) / DONSON (21q22.11)
RPL38 (17q25.1) / DONSON (21q22.11)UFD1L (22q11.21) / DONSON (21q22.11)XKR4 (8q12.1) / DONSON (21q22.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DONSON   2993
Cards
Entrez_Gene (NCBI)DONSON  29980  downstream neighbor of SON
AliasesB17; C21orf60
GeneCards (Weizmann)DONSON
Ensembl hg19 (Hinxton)ENSG00000159147 [Gene_View]  chr21:34949859-34961014 [Contig_View]  DONSON [Vega]
Ensembl hg38 (Hinxton)ENSG00000159147 [Gene_View]  chr21:34949859-34961014 [Contig_View]  DONSON [Vega]
ICGC DataPortalENSG00000159147
TCGA cBioPortalDONSON
AceView (NCBI)DONSON
Genatlas (Paris)DONSON
WikiGenes29980
SOURCE (Princeton)DONSON
Genetics Home Reference (NIH)DONSON
Genomic and cartography
GoldenPath hg19 (UCSC)DONSON  -     chr21:34949859-34961014 -  21q22.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DONSON  -     21q22.11   [Description]    (hg38-Dec_2013)
EnsemblDONSON - 21q22.11 [CytoView hg19]  DONSON - 21q22.11 [CytoView hg38]
Mapping of homologs : NCBIDONSON [Mapview hg19]  DONSON [Mapview hg38]
OMIM611428   
Gene and transcription
Genbank (Entrez)AF232673 AF232674 AF232675 AK001274 AK074964
RefSeq transcript (Entrez)NM_017613 NM_145794 NM_145795
RefSeq genomic (Entrez)NC_000021 NC_018932 NT_011512 NW_004929426
Consensus coding sequences : CCDS (NCBI)DONSON
Cluster EST : UnigeneHs.436341 [ NCBI ]
CGAP (NCI)Hs.436341
Alternative Splicing GalleryENSG00000159147
Gene ExpressionDONSON [ NCBI-GEO ]   DONSON [ EBI - ARRAY_EXPRESS ]   DONSON [ SEEK ]   DONSON [ MEM ]
Gene Expression Viewer (FireBrowse)DONSON [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)29980
GTEX Portal (Tissue expression)DONSON
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NYP3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NYP3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NYP3
Splice isoforms : SwissVarQ9NYP3
PhosPhoSitePlusQ9NYP3
Domains : Interpro (EBI)Donson   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DONSON
DMDM Disease mutations29980
Blocks (Seattle)DONSON
SuperfamilyQ9NYP3
Human Protein AtlasENSG00000159147
Peptide AtlasQ9NYP3
HPRD09926
IPIIPI00021092   IPI00216598   IPI00289622   IPI00956527   IPI00658076   IPI00657996   IPI00658059   IPI00879151   IPI01026227   IPI00927213   IPI00925701   
Protein Interaction databases
DIP (DOE-UCLA)Q9NYP3
IntAct (EBI)Q9NYP3
FunCoupENSG00000159147
BioGRIDDONSON
STRING (EMBL)DONSON
ZODIACDONSON
Ontologies - Pathways
QuickGOQ9NYP3
Ontology : AmiGOmolecular_function  cellular_component  nucleus  multicellular organismal development  biological_process  
Ontology : EGO-EBImolecular_function  cellular_component  nucleus  multicellular organismal development  biological_process  
NDEx NetworkDONSON
Atlas of Cancer Signalling NetworkDONSON
Wikipedia pathwaysDONSON
Orthology - Evolution
OrthoDB29980
GeneTree (enSembl)ENSG00000159147
Phylogenetic Trees/Animal Genes : TreeFamDONSON
HOVERGENQ9NYP3
HOGENOMQ9NYP3
Homologs : HomoloGeneDONSON
Homology/Alignments : Family Browser (UCSC)DONSON
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDONSON [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DONSON
dbVarDONSON
ClinVarDONSON
1000_GenomesDONSON 
Exome Variant ServerDONSON
ExAC (Exome Aggregation Consortium)DONSON (select the gene name)
Genetic variants : HAPMAP29980
Genomic Variants (DGV)DONSON [DGVbeta]
DECIPHER (Syndromes)21:34949859-34961014  ENSG00000159147
CONAN: Copy Number AnalysisDONSON 
Mutations
ICGC Data PortalDONSON 
TCGA Data PortalDONSON 
Broad Tumor PortalDONSON
OASIS PortalDONSON [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDONSON  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDONSON
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DONSON
DgiDB (Drug Gene Interaction Database)DONSON
DoCM (Curated mutations)DONSON (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DONSON (select a term)
intoGenDONSON
Cancer3DDONSON(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611428   
Orphanet
MedgenDONSON
Genetic Testing Registry DONSON
NextProtQ9NYP3 [Medical]
TSGene29980
GENETestsDONSON
Huge Navigator DONSON [HugePedia]
snp3D : Map Gene to Disease29980
BioCentury BCIQDONSON
ClinGenDONSON
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD29980
Chemical/Pharm GKB GenePA27459
Clinical trialDONSON
Miscellaneous
canSAR (ICR)DONSON (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDONSON
EVEXDONSON
GoPubMedDONSON
iHOPDONSON
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:02:05 CET 2017

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