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DPEP2 (dipeptidase 2)

Identity

Other aliasMBD2
HGNC (Hugo) DPEP2
LocusID (NCBI) 64174
Atlas_Id 62603
Location 16q22.1  [Link to chromosome band 16q22]
Location_base_pair Starts at 68021293 and ends at 68033421 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DPEP2   23028
Cards
Entrez_Gene (NCBI)DPEP2  64174  dipeptidase 2
AliasesMBD2
GeneCards (Weizmann)DPEP2
Ensembl hg19 (Hinxton)ENSG00000167261 [Gene_View]  chr16:68021293-68033421 [Contig_View]  DPEP2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000167261 [Gene_View]  chr16:68021293-68033421 [Contig_View]  DPEP2 [Vega]
ICGC DataPortalENSG00000167261
TCGA cBioPortalDPEP2
AceView (NCBI)DPEP2
Genatlas (Paris)DPEP2
WikiGenes64174
SOURCE (Princeton)DPEP2
Genetics Home Reference (NIH)DPEP2
Genomic and cartography
GoldenPath hg19 (UCSC)DPEP2  -     chr16:68021293-68033421 -  16q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DPEP2  -     16q22.1   [Description]    (hg38-Dec_2013)
EnsemblDPEP2 - 16q22.1 [CytoView hg19]  DPEP2 - 16q22.1 [CytoView hg38]
Mapping of homologs : NCBIDPEP2 [Mapview hg19]  DPEP2 [Mapview hg38]
OMIM609925   
Gene and transcription
Genbank (Entrez)AJ295149 AK092884 AK298003 AK315090 AY358454
RefSeq transcript (Entrez)NM_022355
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010498 NW_004929402
Consensus coding sequences : CCDS (NCBI)DPEP2
Cluster EST : UnigeneHs.372633 [ NCBI ]
CGAP (NCI)Hs.372633
Alternative Splicing GalleryENSG00000167261
Gene ExpressionDPEP2 [ NCBI-GEO ]   DPEP2 [ EBI - ARRAY_EXPRESS ]   DPEP2 [ SEEK ]   DPEP2 [ MEM ]
Gene Expression Viewer (FireBrowse)DPEP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64174
GTEX Portal (Tissue expression)DPEP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H4A9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H4A9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H4A9
Splice isoforms : SwissVarQ9H4A9
Catalytic activity : Enzyme3.4.13.19 [ Enzyme-Expasy ]   3.4.13.193.4.13.19 [ IntEnz-EBI ]   3.4.13.19 [ BRENDA ]   3.4.13.19 [ KEGG ]   
PhosPhoSitePlusQ9H4A9
Domaine pattern : Prosite (Expaxy)RENAL_DIPEPTIDASE_1 (PS00869)    RENAL_DIPEPTIDASE_2 (PS51365)   
Domains : Interpro (EBI)Dipep_AS    Dpep2    Renal_dipep_fam   
Domain families : Pfam (Sanger)Peptidase_M19 (PF01244)   
Domain families : Pfam (NCBI)pfam01244   
Conserved Domain (NCBI)DPEP2
DMDM Disease mutations64174
Blocks (Seattle)DPEP2
SuperfamilyQ9H4A9
Human Protein AtlasENSG00000167261
Peptide AtlasQ9H4A9
HPRD07011
IPIIPI00007127   IPI00290954   IPI00902632   IPI00910675   IPI00953503   
Protein Interaction databases
DIP (DOE-UCLA)Q9H4A9
IntAct (EBI)Q9H4A9
FunCoupENSG00000167261
BioGRIDDPEP2
STRING (EMBL)DPEP2
ZODIACDPEP2
Ontologies - Pathways
QuickGOQ9H4A9
Ontology : AmiGOproteolysis  metalloexopeptidase activity  dipeptidyl-peptidase activity  dipeptidase activity  anchored component of membrane  metal ion binding  
Ontology : EGO-EBIproteolysis  metalloexopeptidase activity  dipeptidyl-peptidase activity  dipeptidase activity  anchored component of membrane  metal ion binding  
NDEx NetworkDPEP2
Atlas of Cancer Signalling NetworkDPEP2
Wikipedia pathwaysDPEP2
Orthology - Evolution
OrthoDB64174
GeneTree (enSembl)ENSG00000167261
Phylogenetic Trees/Animal Genes : TreeFamDPEP2
HOVERGENQ9H4A9
HOGENOMQ9H4A9
Homologs : HomoloGeneDPEP2
Homology/Alignments : Family Browser (UCSC)DPEP2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDPEP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DPEP2
dbVarDPEP2
ClinVarDPEP2
1000_GenomesDPEP2 
Exome Variant ServerDPEP2
ExAC (Exome Aggregation Consortium)DPEP2 (select the gene name)
Genetic variants : HAPMAP64174
Genomic Variants (DGV)DPEP2 [DGVbeta]
DECIPHER (Syndromes)16:68021293-68033421  ENSG00000167261
CONAN: Copy Number AnalysisDPEP2 
Mutations
ICGC Data PortalDPEP2 
TCGA Data PortalDPEP2 
Broad Tumor PortalDPEP2
OASIS PortalDPEP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDPEP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDPEP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DPEP2
DgiDB (Drug Gene Interaction Database)DPEP2
DoCM (Curated mutations)DPEP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DPEP2 (select a term)
intoGenDPEP2
Cancer3DDPEP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609925   
Orphanet
MedgenDPEP2
Genetic Testing Registry DPEP2
NextProtQ9H4A9 [Medical]
TSGene64174
GENETestsDPEP2
Huge Navigator DPEP2 [HugePedia]
snp3D : Map Gene to Disease64174
BioCentury BCIQDPEP2
ClinGenDPEP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64174
Chemical/Pharm GKB GenePA134985997
Clinical trialDPEP2
Miscellaneous
canSAR (ICR)DPEP2 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDPEP2
EVEXDPEP2
GoPubMedDPEP2
iHOPDPEP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:02:06 CET 2017

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