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DPEP3 (dipeptidase 3)

Identity

Other aliasMBD3
HGNC (Hugo) DPEP3
LocusID (NCBI) 64180
Atlas_Id 62604
Location 16q22.1  [Link to chromosome band 16q22]
Location_base_pair Starts at 67975663 and ends at 67980549 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CENPT (16q22.1) / DPEP3 (16q22.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DPEP3   23029
Cards
Entrez_Gene (NCBI)DPEP3  64180  dipeptidase 3
AliasesMBD3
GeneCards (Weizmann)DPEP3
Ensembl hg19 (Hinxton)ENSG00000141096 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000141096 [Gene_View]  chr16:67975663-67980549 [Contig_View]  DPEP3 [Vega]
ICGC DataPortalENSG00000141096
TCGA cBioPortalDPEP3
AceView (NCBI)DPEP3
Genatlas (Paris)DPEP3
WikiGenes64180
SOURCE (Princeton)DPEP3
Genetics Home Reference (NIH)DPEP3
Genomic and cartography
GoldenPath hg38 (UCSC)DPEP3  -     chr16:67975663-67980549 -  16q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DPEP3  -     16q22.1   [Description]    (hg19-Feb_2009)
EnsemblDPEP3 - 16q22.1 [CytoView hg19]  DPEP3 - 16q22.1 [CytoView hg38]
Mapping of homologs : NCBIDPEP3 [Mapview hg19]  DPEP3 [Mapview hg38]
OMIM609926   
Gene and transcription
Genbank (Entrez)AJ291679 AK057401 AY358390 BC037243 BC057789
RefSeq transcript (Entrez)NM_001129758 NM_022357
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DPEP3
Cluster EST : UnigeneHs.302028 [ NCBI ]
CGAP (NCI)Hs.302028
Alternative Splicing GalleryENSG00000141096
Gene ExpressionDPEP3 [ NCBI-GEO ]   DPEP3 [ EBI - ARRAY_EXPRESS ]   DPEP3 [ SEEK ]   DPEP3 [ MEM ]
Gene Expression Viewer (FireBrowse)DPEP3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64180
GTEX Portal (Tissue expression)DPEP3
Human Protein AtlasENSG00000141096-DPEP3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H4B8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H4B8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H4B8
Splice isoforms : SwissVarQ9H4B8
Catalytic activity : Enzyme3.4.13.19 [ Enzyme-Expasy ]   3.4.13.193.4.13.19 [ IntEnz-EBI ]   3.4.13.19 [ BRENDA ]   3.4.13.19 [ KEGG ]   
PhosPhoSitePlusQ9H4B8
Domaine pattern : Prosite (Expaxy)RENAL_DIPEPTIDASE_1 (PS00869)    RENAL_DIPEPTIDASE_2 (PS51365)   
Domains : Interpro (EBI)Dipep_AS    Metal_Hydrolase    Renal_dipep_fam   
Domain families : Pfam (Sanger)Peptidase_M19 (PF01244)   
Domain families : Pfam (NCBI)pfam01244   
Conserved Domain (NCBI)DPEP3
DMDM Disease mutations64180
Blocks (Seattle)DPEP3
SuperfamilyQ9H4B8
Human Protein Atlas [tissue]ENSG00000141096-DPEP3 [tissue]
Peptide AtlasQ9H4B8
HPRD07012
IPIIPI00641736   IPI00007131   
Protein Interaction databases
DIP (DOE-UCLA)Q9H4B8
IntAct (EBI)Q9H4B8
FunCoupENSG00000141096
BioGRIDDPEP3
STRING (EMBL)DPEP3
ZODIACDPEP3
Ontologies - Pathways
QuickGOQ9H4B8
Ontology : AmiGOproteolysis  male meiotic nuclear division  metalloexopeptidase activity  dipeptidyl-peptidase activity  dipeptidase activity  anchored component of membrane  metal ion binding  
Ontology : EGO-EBIproteolysis  male meiotic nuclear division  metalloexopeptidase activity  dipeptidyl-peptidase activity  dipeptidase activity  anchored component of membrane  metal ion binding  
NDEx NetworkDPEP3
Atlas of Cancer Signalling NetworkDPEP3
Wikipedia pathwaysDPEP3
Orthology - Evolution
OrthoDB64180
GeneTree (enSembl)ENSG00000141096
Phylogenetic Trees/Animal Genes : TreeFamDPEP3
HOVERGENQ9H4B8
HOGENOMQ9H4B8
Homologs : HomoloGeneDPEP3
Homology/Alignments : Family Browser (UCSC)DPEP3
Gene fusions - Rearrangements
Fusion: Tumor Portal DPEP3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDPEP3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DPEP3
dbVarDPEP3
ClinVarDPEP3
1000_GenomesDPEP3 
Exome Variant ServerDPEP3
ExAC (Exome Aggregation Consortium)ENSG00000141096
GNOMAD BrowserENSG00000141096
Genetic variants : HAPMAP64180
Genomic Variants (DGV)DPEP3 [DGVbeta]
DECIPHERDPEP3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDPEP3 
Mutations
ICGC Data PortalDPEP3 
TCGA Data PortalDPEP3 
Broad Tumor PortalDPEP3
OASIS PortalDPEP3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDPEP3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDPEP3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DPEP3
DgiDB (Drug Gene Interaction Database)DPEP3
DoCM (Curated mutations)DPEP3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DPEP3 (select a term)
intoGenDPEP3
Cancer3DDPEP3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609926   
Orphanet
MedgenDPEP3
Genetic Testing Registry DPEP3
NextProtQ9H4B8 [Medical]
TSGene64180
GENETestsDPEP3
Target ValidationDPEP3
Huge Navigator DPEP3 [HugePedia]
snp3D : Map Gene to Disease64180
BioCentury BCIQDPEP3
ClinGenDPEP3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64180
Chemical/Pharm GKB GenePA134978786
Clinical trialDPEP3
Miscellaneous
canSAR (ICR)DPEP3 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDPEP3
EVEXDPEP3
GoPubMedDPEP3
iHOPDPEP3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:45:02 CET 2017

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