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DPRX (divergent-paired related homeobox)

Identity

Other alias-
HGNC (Hugo) DPRX
LocusID (NCBI) 503834
Atlas_Id 62620
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 54135310 and ends at 54140263 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DPRX   32166
Cards
Entrez_Gene (NCBI)DPRX  503834  divergent-paired related homeobox
Aliases
GeneCards (Weizmann)DPRX
Ensembl hg19 (Hinxton)ENSG00000204595 [Gene_View]  chr19:54135310-54140263 [Contig_View]  DPRX [Vega]
Ensembl hg38 (Hinxton)ENSG00000204595 [Gene_View]  chr19:54135310-54140263 [Contig_View]  DPRX [Vega]
ICGC DataPortalENSG00000204595
TCGA cBioPortalDPRX
AceView (NCBI)DPRX
Genatlas (Paris)DPRX
WikiGenes503834
SOURCE (Princeton)DPRX
Genetics Home Reference (NIH)DPRX
Genomic and cartography
GoldenPath hg19 (UCSC)DPRX  -     chr19:54135310-54140263 +  19q13.42   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DPRX  -     19q13.42   [Description]    (hg38-Dec_2013)
EnsemblDPRX - 19q13.42 [CytoView hg19]  DPRX - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIDPRX [Mapview hg19]  DPRX [Mapview hg38]
OMIM611165   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001012728
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)DPRX
Cluster EST : UnigeneHs.579941 [ NCBI ]
CGAP (NCI)Hs.579941
Alternative Splicing GalleryENSG00000204595
Gene ExpressionDPRX [ NCBI-GEO ]   DPRX [ EBI - ARRAY_EXPRESS ]   DPRX [ SEEK ]   DPRX [ MEM ]
Gene Expression Viewer (FireBrowse)DPRX [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)503834
GTEX Portal (Tissue expression)DPRX
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NFQ7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NFQ7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NFQ7
Splice isoforms : SwissVarA6NFQ7
PhosPhoSitePlusA6NFQ7
Domaine pattern : Prosite (Expaxy)HOMEOBOX_1 (PS00027)    HOMEOBOX_2 (PS50071)   
Domains : Interpro (EBI)Homeobox_CS    Homeobox_dom    Homeodomain-like   
Domain families : Pfam (Sanger)Homeobox (PF00046)   
Domain families : Pfam (NCBI)pfam00046   
Domain families : Smart (EMBL)HOX (SM00389)  
Conserved Domain (NCBI)DPRX
DMDM Disease mutations503834
Blocks (Seattle)DPRX
SuperfamilyA6NFQ7
Human Protein AtlasENSG00000204595
Peptide AtlasA6NFQ7
HPRD10561
IPIIPI00556337   
Protein Interaction databases
DIP (DOE-UCLA)A6NFQ7
IntAct (EBI)A6NFQ7
FunCoupENSG00000204595
BioGRIDDPRX
STRING (EMBL)DPRX
ZODIACDPRX
Ontologies - Pathways
QuickGOA6NFQ7
Ontology : AmiGOnucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  sequence-specific DNA binding  
Ontology : EGO-EBInucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  sequence-specific DNA binding  
NDEx NetworkDPRX
Atlas of Cancer Signalling NetworkDPRX
Wikipedia pathwaysDPRX
Orthology - Evolution
OrthoDB503834
GeneTree (enSembl)ENSG00000204595
Phylogenetic Trees/Animal Genes : TreeFamDPRX
HOVERGENA6NFQ7
HOGENOMA6NFQ7
Homologs : HomoloGeneDPRX
Homology/Alignments : Family Browser (UCSC)DPRX
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDPRX [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DPRX
dbVarDPRX
ClinVarDPRX
1000_GenomesDPRX 
Exome Variant ServerDPRX
ExAC (Exome Aggregation Consortium)DPRX (select the gene name)
Genetic variants : HAPMAP503834
Genomic Variants (DGV)DPRX [DGVbeta]
DECIPHER (Syndromes)19:54135310-54140263  ENSG00000204595
CONAN: Copy Number AnalysisDPRX 
Mutations
ICGC Data PortalDPRX 
TCGA Data PortalDPRX 
Broad Tumor PortalDPRX
OASIS PortalDPRX [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDPRX  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDPRX
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DPRX
DgiDB (Drug Gene Interaction Database)DPRX
DoCM (Curated mutations)DPRX (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DPRX (select a term)
intoGenDPRX
Cancer3DDPRX(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611165   
Orphanet
MedgenDPRX
Genetic Testing Registry DPRX
NextProtA6NFQ7 [Medical]
TSGene503834
GENETestsDPRX
Huge Navigator DPRX [HugePedia]
snp3D : Map Gene to Disease503834
BioCentury BCIQDPRX
ClinGenDPRX
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD503834
Chemical/Pharm GKB GenePA142671957
Clinical trialDPRX
Miscellaneous
canSAR (ICR)DPRX (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDPRX
EVEXDPRX
GoPubMedDPRX
iHOPDPRX
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:02:10 CET 2017

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